Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 AC068587.6-202ENST00000641839 5619 ntBASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 CICP23-201ENST00000605013 2741 ntBASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 AC018665.1-201ENST00000622927 1362 ntBASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 AC004466.1-201ENST00000599515 1080 ntBASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 AL022328.1-201ENST00000610050 478 ntBASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ECHDC1Q9NTX5 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 AC005034.1-201ENST00000426657 489 ntBASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 AC025279.2-201ENST00000569730 653 ntBASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 AL035252.4-201ENST00000624174 288 ntBASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 NORAD-201ENST00000565493 5339 ntBASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ECHDC1Q9NTX5 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms