Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN18Q99952 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN18Q99952 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PTPN18Q99952 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN18Q99952 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN18Q99952 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PTPN18Q99952 AC090502.4-201ENST00000551714 1386 ntBASIC17.12■□□□□ 0.33
PTPN18Q99952 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN18Q99952 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN18Q99952 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN18Q99952 KRT8P31-201ENST00000504812 1408 ntBASIC17.12■□□□□ 0.33
PTPN18Q99952 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN18Q99952 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN18Q99952 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN18Q99952 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN18Q99952 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PTPN18Q99952 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN18Q99952 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN18Q99952 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN18Q99952 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN18Q99952 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN18Q99952 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PTPN18Q99952 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN18Q99952 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN18Q99952 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN18Q99952 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN18Q99952 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN18Q99952 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN18Q99952 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC17.11■□□□□ 0.33
PTPN18Q99952 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PTPN18Q99952 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN18Q99952 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.11■□□□□ 0.33
PTPN18Q99952 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN18Q99952 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC17.11■□□□□ 0.33
PTPN18Q99952 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN18Q99952 FTH1P22-201ENST00000456305 520 ntBASIC17.11■□□□□ 0.33
PTPN18Q99952 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN18Q99952 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN18Q99952 NSD1-211ENST00000511258 809 ntTSL 3 BASIC17.11■□□□□ 0.33
PTPN18Q99952 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PTPN18Q99952 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PTPN18Q99952 AC027237.1-201ENST00000560942 655 ntBASIC17.11■□□□□ 0.33
PTPN18Q99952 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN18Q99952 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN18Q99952 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC17.11■□□□□ 0.33
PTPN18Q99952 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC17.11■□□□□ 0.33
PTPN18Q99952 MIR3180-2-201ENST00000581748 88 ntBASIC17.11■□□□□ 0.33
PTPN18Q99952 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.11■□□□□ 0.33
PTPN18Q99952 AC007326.1-201ENST00000604539 458 ntBASIC17.11■□□□□ 0.33
PTPN18Q99952 AC133540.1-201ENST00000620845 1019 ntBASIC17.11■□□□□ 0.33
PTPN18Q99952 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC17.11■□□□□ 0.33
PTPN18Q99952 LINC00431-202ENST00000636375 159 ntBASIC17.11■□□□□ 0.33
PTPN18Q99952 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN18Q99952 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PTPN18Q99952 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN18Q99952 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC17.11■□□□□ 0.33
PTPN18Q99952 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN18Q99952 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN18Q99952 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN18Q99952 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN18Q99952 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN18Q99952 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN18Q99952 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN18Q99952 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PTPN18Q99952 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN18Q99952 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN18Q99952 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN18Q99952 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN18Q99952 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN18Q99952 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
PTPN18Q99952 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN18Q99952 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN18Q99952 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN18Q99952 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN18Q99952 AL139008.1-201ENST00000437894 228 ntBASIC17.1■□□□□ 0.33
PTPN18Q99952 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC17.1■□□□□ 0.33
PTPN18Q99952 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPN18Q99952 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PTPN18Q99952 RN7SL596P-201ENST00000582123 288 ntBASIC17.1■□□□□ 0.33
PTPN18Q99952 AC006158.1-201ENST00000610661 249 ntBASIC17.1■□□□□ 0.33
PTPN18Q99952 FO393412.1-201ENST00000619841 382 ntBASIC17.1■□□□□ 0.33
PTPN18Q99952 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPN18Q99952 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN18Q99952 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN18Q99952 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN18Q99952 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN18Q99952 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN18Q99952 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN18Q99952 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN18Q99952 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN18Q99952 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN18Q99952 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN18Q99952 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN18Q99952 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN18Q99952 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN18Q99952 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN18Q99952 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN18Q99952 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.09■□□□□ 0.33
PTPN18Q99952 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN18Q99952 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms