Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPAS2Q99743 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPAS2Q99743 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPAS2Q99743 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPAS2Q99743 FAM207CP-201ENST00000443486 507 ntBASIC14.99□□□□□ -0.01
NPAS2Q99743 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.99□□□□□ -0.01
NPAS2Q99743 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
NPAS2Q99743 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.99□□□□□ -0.01
NPAS2Q99743 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPAS2Q99743 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
NPAS2Q99743 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.99□□□□□ -0.01
NPAS2Q99743 SERBP1P5-201ENST00000510079 1181 ntBASIC14.99□□□□□ -0.01
NPAS2Q99743 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.99□□□□□ -0.01
NPAS2Q99743 AC009407.1-201ENST00000568958 598 ntBASIC14.99□□□□□ -0.01
NPAS2Q99743 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.99□□□□□ -0.01
NPAS2Q99743 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPAS2Q99743 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPAS2Q99743 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPAS2Q99743 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.99□□□□□ -0.01
NPAS2Q99743 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
NPAS2Q99743 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.99□□□□□ -0.01
NPAS2Q99743 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.99□□□□□ -0.01
NPAS2Q99743 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.99□□□□□ -0.01
NPAS2Q99743 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPAS2Q99743 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPAS2Q99743 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.99□□□□□ -0.01
NPAS2Q99743 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
NPAS2Q99743 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.99□□□□□ -0.01
NPAS2Q99743 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPAS2Q99743 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.98□□□□□ -0.01
NPAS2Q99743 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS2Q99743 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.98□□□□□ -0.01
NPAS2Q99743 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.98□□□□□ -0.01
NPAS2Q99743 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
NPAS2Q99743 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS2Q99743 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS2Q99743 AC087499.5-201ENST00000452760 1342 ntBASIC14.98□□□□□ -0.01
NPAS2Q99743 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.98□□□□□ -0.01
NPAS2Q99743 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.98□□□□□ -0.01
NPAS2Q99743 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.98□□□□□ -0.01
NPAS2Q99743 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.98□□□□□ -0.01
NPAS2Q99743 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.98□□□□□ -0.01
NPAS2Q99743 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NPAS2Q99743 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NPAS2Q99743 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS2Q99743 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
NPAS2Q99743 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NPAS2Q99743 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS2Q99743 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS2Q99743 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.98□□□□□ -0.01
NPAS2Q99743 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.98□□□□□ -0.01
NPAS2Q99743 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS2Q99743 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS2Q99743 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS2Q99743 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.98□□□□□ -0.01
NPAS2Q99743 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.98□□□□□ -0.01
NPAS2Q99743 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.98□□□□□ -0.01
NPAS2Q99743 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.98□□□□□ -0.01
NPAS2Q99743 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS2Q99743 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS2Q99743 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
NPAS2Q99743 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
NPAS2Q99743 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS2Q99743 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS2Q99743 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.98□□□□□ -0.01
NPAS2Q99743 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.98□□□□□ -0.01
NPAS2Q99743 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.98□□□□□ -0.01
NPAS2Q99743 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS2Q99743 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS2Q99743 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.98□□□□□ -0.01
NPAS2Q99743 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS2Q99743 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS2Q99743 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
NPAS2Q99743 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS2Q99743 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS2Q99743 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS2Q99743 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS2Q99743 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NPAS2Q99743 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.97□□□□□ -0.01
NPAS2Q99743 REXO1L2P-201ENST00000425429 2069 ntBASIC14.97□□□□□ -0.01
NPAS2Q99743 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS2Q99743 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NPAS2Q99743 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.97□□□□□ -0.01
NPAS2Q99743 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.97□□□□□ -0.01
NPAS2Q99743 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS2Q99743 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
NPAS2Q99743 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS2Q99743 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS2Q99743 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS2Q99743 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.97□□□□□ -0.01
NPAS2Q99743 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
NPAS2Q99743 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.97□□□□□ -0.01
NPAS2Q99743 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NPAS2Q99743 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
NPAS2Q99743 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.97□□□□□ -0.01
NPAS2Q99743 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS2Q99743 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS2Q99743 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.97□□□□□ -0.01
NPAS2Q99743 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.97□□□□□ -0.01
NPAS2Q99743 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms