Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 HIST2H2BA-201ENST00000412169 381 ntBASIC17.5■□□□□ 0.39
CDCA5Q96FF9 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 ALG3P1-201ENST00000508806 1114 ntBASIC17.5■□□□□ 0.39
CDCA5Q96FF9 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 C2orf69P1-201ENST00000563532 1093 ntBASIC17.5■□□□□ 0.39
CDCA5Q96FF9 AL022344.2-201ENST00000568976 968 ntBASIC17.5■□□□□ 0.39
CDCA5Q96FF9 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDCA5Q96FF9 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC17.49■□□□□ 0.39
CDCA5Q96FF9 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 MRPL22P1-201ENST00000505398 616 ntBASIC17.49■□□□□ 0.39
CDCA5Q96FF9 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 FO393412.1-201ENST00000619841 382 ntBASIC17.49■□□□□ 0.39
CDCA5Q96FF9 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 AC090502.4-201ENST00000551714 1386 ntBASIC17.49■□□□□ 0.39
CDCA5Q96FF9 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDCA5Q96FF9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 SERF2-206ENST00000409291 807 ntTSL 3 BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 TSPY25P-201ENST00000429463 745 ntBASIC17.48■□□□□ 0.39
CDCA5Q96FF9 AL139008.1-201ENST00000437894 228 ntBASIC17.48■□□□□ 0.39
CDCA5Q96FF9 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 FTH1P22-201ENST00000456305 520 ntBASIC17.48■□□□□ 0.39
CDCA5Q96FF9 RN7SL81P-201ENST00000493781 261 ntBASIC17.48■□□□□ 0.39
CDCA5Q96FF9 ALG1L13P-202ENST00000519320 584 ntBASIC17.48■□□□□ 0.39
CDCA5Q96FF9 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 MIR5196-201ENST00000578146 115 ntBASIC17.48■□□□□ 0.39
CDCA5Q96FF9 NUDT4P2-201ENST00000578341 546 ntBASIC17.48■□□□□ 0.39
CDCA5Q96FF9 MIR3180-2-201ENST00000581748 88 ntBASIC17.48■□□□□ 0.39
CDCA5Q96FF9 AC009560.1-201ENST00000620208 434 ntBASIC17.48■□□□□ 0.39
CDCA5Q96FF9 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA5Q96FF9 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms