Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SIX5Q8N196 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.63■□□□□ 0.09
SIX5Q8N196 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.63■□□□□ 0.09
SIX5Q8N196 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SIX5Q8N196 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.62■□□□□ 0.09
SIX5Q8N196 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIX5Q8N196 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SIX5Q8N196 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIX5Q8N196 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIX5Q8N196 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIX5Q8N196 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SIX5Q8N196 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIX5Q8N196 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIX5Q8N196 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIX5Q8N196 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIX5Q8N196 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.62■□□□□ 0.09
SIX5Q8N196 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.62■□□□□ 0.09
SIX5Q8N196 RNMTL1P1-201ENST00000454103 560 ntBASIC15.62■□□□□ 0.09
SIX5Q8N196 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.62■□□□□ 0.09
SIX5Q8N196 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.62■□□□□ 0.09
SIX5Q8N196 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.62■□□□□ 0.09
SIX5Q8N196 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.62■□□□□ 0.09
SIX5Q8N196 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.62■□□□□ 0.09
SIX5Q8N196 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.62■□□□□ 0.09
SIX5Q8N196 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.62■□□□□ 0.09
SIX5Q8N196 AC025181.2-201ENST00000606994 802 ntBASIC15.62■□□□□ 0.09
SIX5Q8N196 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIX5Q8N196 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SIX5Q8N196 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
SIX5Q8N196 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SIX5Q8N196 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIX5Q8N196 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIX5Q8N196 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SIX5Q8N196 DOC2GP-204ENST00000639052 2548 ntBASIC15.62■□□□□ 0.09
SIX5Q8N196 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIX5Q8N196 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.62■□□□□ 0.09
SIX5Q8N196 ALOX12P2-203ENST00000570921 1945 ntBASIC15.62■□□□□ 0.09
SIX5Q8N196 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.62■□□□□ 0.09
SIX5Q8N196 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SIX5Q8N196 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SIX5Q8N196 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.62■□□□□ 0.09
SIX5Q8N196 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
SIX5Q8N196 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIX5Q8N196 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SIX5Q8N196 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SIX5Q8N196 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SIX5Q8N196 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.61■□□□□ 0.09
SIX5Q8N196 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.61■□□□□ 0.09
SIX5Q8N196 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.61■□□□□ 0.09
SIX5Q8N196 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.61■□□□□ 0.09
SIX5Q8N196 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.61■□□□□ 0.09
SIX5Q8N196 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
SIX5Q8N196 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.61■□□□□ 0.09
SIX5Q8N196 SSR1P1-201ENST00000407630 814 ntBASIC15.61■□□□□ 0.09
SIX5Q8N196 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.61■□□□□ 0.09
SIX5Q8N196 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.61■□□□□ 0.09
SIX5Q8N196 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.61■□□□□ 0.09
SIX5Q8N196 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.61■□□□□ 0.09
SIX5Q8N196 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.61■□□□□ 0.09
SIX5Q8N196 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SIX5Q8N196 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SIX5Q8N196 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
SIX5Q8N196 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIX5Q8N196 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.61■□□□□ 0.09
SIX5Q8N196 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.61■□□□□ 0.09
SIX5Q8N196 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SIX5Q8N196 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.6■□□□□ 0.09
SIX5Q8N196 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
SIX5Q8N196 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms