Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AC107918.4-202ENST00000641623 219 ntBASIC12.73□□□□□ -0.37
ZNF546Q86UE3 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 KRT18P21-201ENST00000515767 1272 ntBASIC12.72□□□□□ -0.37
ZNF546Q86UE3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 AC002347.1-201ENST00000569543 541 ntBASIC12.72□□□□□ -0.37
ZNF546Q86UE3 AL450472.2-201ENST00000603663 1156 ntBASIC12.72□□□□□ -0.37
ZNF546Q86UE3 AC008667.4-201ENST00000607370 168 ntBASIC12.72□□□□□ -0.37
ZNF546Q86UE3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 MIR1199-201ENST00000621445 119 ntBASIC12.72□□□□□ -0.37
ZNF546Q86UE3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 KRT8P24-201ENST00000560290 1559 ntBASIC12.72□□□□□ -0.37
ZNF546Q86UE3 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF546Q86UE3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.71□□□□□ -0.37
ZNF546Q86UE3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 TMEM198B-204ENST00000484016 896 ntBASIC12.71□□□□□ -0.37
ZNF546Q86UE3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 MIR4515-201ENST00000584082 81 ntBASIC12.71□□□□□ -0.37
ZNF546Q86UE3 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms