Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.59■□□□□ 0.41
SHROOM1Q2M3G4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHROOM1Q2M3G4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHROOM1Q2M3G4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHROOM1Q2M3G4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SHROOM1Q2M3G4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SHROOM1Q2M3G4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SHROOM1Q2M3G4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.58■□□□□ 0.41
SHROOM1Q2M3G4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SHROOM1Q2M3G4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SHROOM1Q2M3G4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SHROOM1Q2M3G4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.58■□□□□ 0.41
SHROOM1Q2M3G4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SHROOM1Q2M3G4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 AL662890.1-201ENST00000396818 632 ntBASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 AC106872.11-201ENST00000605838 421 ntBASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 AC015967.2-201ENST00000624092 234 ntBASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 AC006435.4-201ENST00000625037 234 ntBASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 AL356737.1-201ENST00000634391 234 ntBASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 SHC1P1-201ENST00000425230 1745 ntBASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.58■□□□□ 0.4
SHROOM1Q2M3G4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 UPF3AP2-201ENST00000457924 1132 ntBASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 RN7SL11P-201ENST00000471305 293 ntBASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 AC005740.2-201ENST00000511085 419 ntBASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 AC026740.1-201ENST00000607068 791 ntBASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 AC068587.8-201ENST00000641239 219 ntBASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SHROOM1Q2M3G4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SHROOM1Q2M3G4 AC003102.2-201ENST00000589195 1469 ntBASIC17.56■□□□□ 0.4
SHROOM1Q2M3G4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHROOM1Q2M3G4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHROOM1Q2M3G4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHROOM1Q2M3G4 LINC00554-201ENST00000564841 3011 ntBASIC17.56■□□□□ 0.4
SHROOM1Q2M3G4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms