Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC10.92□□□□□ -0.66
UBE2D3P61077 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
UBE2D3P61077 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
UBE2D3P61077 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC10.92□□□□□ -0.66
UBE2D3P61077 LINC01230-201ENST00000625222 3017 ntBASIC10.92□□□□□ -0.66
UBE2D3P61077 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC10.92□□□□□ -0.66
UBE2D3P61077 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
UBE2D3P61077 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC10.92□□□□□ -0.66
UBE2D3P61077 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC10.92□□□□□ -0.66
UBE2D3P61077 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC10.92□□□□□ -0.66
UBE2D3P61077 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2D3P61077 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
UBE2D3P61077 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 HAL-202ENST00000538703 2637 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D3P61077 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D3P61077 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC10.91□□□□□ -0.66
UBE2D3P61077 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
UBE2D3P61077 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC10.91□□□□□ -0.66
UBE2D3P61077 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
UBE2D3P61077 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D3P61077 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D3P61077 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC10.91□□□□□ -0.66
UBE2D3P61077 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 AL133267.1-201ENST00000398220 340 ntBASIC10.91□□□□□ -0.66
UBE2D3P61077 AC074338.1-201ENST00000416825 156 ntBASIC10.91□□□□□ -0.66
UBE2D3P61077 AC254562.1-201ENST00000417586 456 ntBASIC10.91□□□□□ -0.66
UBE2D3P61077 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC10.91□□□□□ -0.66
UBE2D3P61077 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D3P61077 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC10.91□□□□□ -0.66
UBE2D3P61077 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC10.91□□□□□ -0.66
UBE2D3P61077 SATB1-217ENST00000493952 626 ntTSL 3 BASIC10.91□□□□□ -0.66
UBE2D3P61077 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC10.91□□□□□ -0.66
UBE2D3P61077 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
UBE2D3P61077 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
UBE2D3P61077 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D3P61077 AL359881.3-201ENST00000602640 1721 ntBASIC10.91□□□□□ -0.66
UBE2D3P61077 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D3P61077 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
UBE2D3P61077 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
UBE2D3P61077 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
UBE2D3P61077 TK1-203ENST00000588734 1681 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D3P61077 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC10.91□□□□□ -0.66
UBE2D3P61077 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D3P61077 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D3P61077 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D3P61077 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D3P61077 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D3P61077 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC10.91□□□□□ -0.66
UBE2D3P61077 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
UBE2D3P61077 GOLGA6L17P-202ENST00000614358 1398 ntBASIC10.9□□□□□ -0.66
UBE2D3P61077 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
UBE2D3P61077 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
UBE2D3P61077 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2D3P61077 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC10.9□□□□□ -0.66
UBE2D3P61077 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2D3P61077 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
UBE2D3P61077 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2D3P61077 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
UBE2D3P61077 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms