Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.39□□□□□ -0.27
DEFA3P59666 TSPY22P-201ENST00000427496 604 ntBASIC13.39□□□□□ -0.27
DEFA3P59666 GPX1P2-201ENST00000429271 606 ntBASIC13.39□□□□□ -0.27
DEFA3P59666 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.39□□□□□ -0.27
DEFA3P59666 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.39□□□□□ -0.27
DEFA3P59666 COX11P1-201ENST00000489116 835 ntBASIC13.39□□□□□ -0.27
DEFA3P59666 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.39□□□□□ -0.27
DEFA3P59666 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.39□□□□□ -0.27
DEFA3P59666 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.39□□□□□ -0.27
DEFA3P59666 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.39□□□□□ -0.27
DEFA3P59666 KRT18P6-201ENST00000555540 1265 ntBASIC13.39□□□□□ -0.27
DEFA3P59666 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.39□□□□□ -0.27
DEFA3P59666 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA3P59666 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA3P59666 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
DEFA3P59666 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA3P59666 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA3P59666 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.39□□□□□ -0.27
DEFA3P59666 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.39□□□□□ -0.27
DEFA3P59666 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA3P59666 FAM90A12P-201ENST00000519497 2375 ntBASIC13.39□□□□□ -0.27
DEFA3P59666 FAM90A24P-201ENST00000520792 2369 ntBASIC13.39□□□□□ -0.27
DEFA3P59666 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA3P59666 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA3P59666 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
DEFA3P59666 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA3P59666 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA3P59666 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA3P59666 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA3P59666 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
DEFA3P59666 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
DEFA3P59666 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
DEFA3P59666 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
DEFA3P59666 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
DEFA3P59666 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
DEFA3P59666 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.38□□□□□ -0.27
DEFA3P59666 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
DEFA3P59666 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.38□□□□□ -0.27
DEFA3P59666 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.38□□□□□ -0.27
DEFA3P59666 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.38□□□□□ -0.27
DEFA3P59666 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
DEFA3P59666 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.38□□□□□ -0.27
DEFA3P59666 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.38□□□□□ -0.27
DEFA3P59666 AC064862.7-201ENST00000604520 867 ntBASIC13.38□□□□□ -0.27
DEFA3P59666 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.38□□□□□ -0.27
DEFA3P59666 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.38□□□□□ -0.27
DEFA3P59666 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.38□□□□□ -0.27
DEFA3P59666 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC13.38□□□□□ -0.27
DEFA3P59666 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC13.38□□□□□ -0.27
DEFA3P59666 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
DEFA3P59666 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
DEFA3P59666 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.38□□□□□ -0.27
DEFA3P59666 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA3P59666 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.38□□□□□ -0.27
DEFA3P59666 AC073869.1-201ENST00000415574 2762 ntBASIC13.37□□□□□ -0.27
DEFA3P59666 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA3P59666 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA3P59666 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.37□□□□□ -0.27
DEFA3P59666 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
DEFA3P59666 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA3P59666 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA3P59666 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.37□□□□□ -0.27
DEFA3P59666 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA3P59666 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA3P59666 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.37□□□□□ -0.27
DEFA3P59666 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA3P59666 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA3P59666 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA3P59666 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.37□□□□□ -0.27
DEFA3P59666 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms