Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN6P56747 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.58□□□□□ -0.08
CLDN6P56747 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN6P56747 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.58□□□□□ -0.08
CLDN6P56747 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CLDN6P56747 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.58□□□□□ -0.08
CLDN6P56747 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.58□□□□□ -0.08
CLDN6P56747 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN6P56747 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.58□□□□□ -0.08
CLDN6P56747 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.58□□□□□ -0.08
CLDN6P56747 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.58□□□□□ -0.08
CLDN6P56747 IQSEC3P1-201ENST00000538799 536 ntBASIC14.58□□□□□ -0.08
CLDN6P56747 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.58□□□□□ -0.08
CLDN6P56747 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN6P56747 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.58□□□□□ -0.08
CLDN6P56747 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN6P56747 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.58□□□□□ -0.08
CLDN6P56747 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.58□□□□□ -0.08
CLDN6P56747 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.58□□□□□ -0.08
CLDN6P56747 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN6P56747 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN6P56747 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN6P56747 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN6P56747 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
CLDN6P56747 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CLDN6P56747 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLDN6P56747 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN6P56747 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN6P56747 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
CLDN6P56747 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN6P56747 AL596276.2-201ENST00000447525 331 ntBASIC14.57□□□□□ -0.08
CLDN6P56747 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.57□□□□□ -0.08
CLDN6P56747 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.57□□□□□ -0.08
CLDN6P56747 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC14.57□□□□□ -0.08
CLDN6P56747 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN6P56747 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN6P56747 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN6P56747 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN6P56747 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN6P56747 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN6P56747 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN6P56747 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN6P56747 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CLDN6P56747 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN6P56747 KRT8P29-201ENST00000420409 1371 ntBASIC14.57□□□□□ -0.08
CLDN6P56747 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 AC055811.4-201ENST00000624039 1754 ntBASIC14.57□□□□□ -0.08
CLDN6P56747 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
CLDN6P56747 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLDN6P56747 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN6P56747 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN6P56747 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
CLDN6P56747 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN6P56747 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CLDN6P56747 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN6P56747 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN6P56747 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CLDN6P56747 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN6P56747 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN6P56747 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN6P56747 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN6P56747 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN6P56747 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN6P56747 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN6P56747 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN6P56747 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN6P56747 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN6P56747 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN6P56747 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN6P56747 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN6P56747 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN6P56747 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms