Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FOXG1P55316 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXG1P55316 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.32□□□□□ -0.28
FOXG1P55316 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXG1P55316 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.32□□□□□ -0.28
FOXG1P55316 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.32□□□□□ -0.28
FOXG1P55316 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXG1P55316 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXG1P55316 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.32□□□□□ -0.28
FOXG1P55316 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.32□□□□□ -0.28
FOXG1P55316 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
FOXG1P55316 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXG1P55316 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXG1P55316 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.32□□□□□ -0.28
FOXG1P55316 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FOXG1P55316 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXG1P55316 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FOXG1P55316 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
FOXG1P55316 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FOXG1P55316 AC099336.1-201ENST00000417053 1171 ntBASIC13.32□□□□□ -0.28
FOXG1P55316 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
FOXG1P55316 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.32□□□□□ -0.28
FOXG1P55316 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.32□□□□□ -0.28
FOXG1P55316 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.32□□□□□ -0.28
FOXG1P55316 BNIP3P42-201ENST00000454982 569 ntBASIC13.32□□□□□ -0.28
FOXG1P55316 AP000812.2-201ENST00000538934 718 ntBASIC13.32□□□□□ -0.28
FOXG1P55316 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.32□□□□□ -0.28
FOXG1P55316 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.32□□□□□ -0.28
FOXG1P55316 BNIP3P29-201ENST00000598302 571 ntBASIC13.32□□□□□ -0.28
FOXG1P55316 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.32□□□□□ -0.28
FOXG1P55316 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
FOXG1P55316 AC011447.5-201ENST00000616168 564 ntBASIC13.32□□□□□ -0.28
FOXG1P55316 COX11-210ENST00000639671 696 ntBASIC13.32□□□□□ -0.28
FOXG1P55316 ZBED1P1-201ENST00000502364 1930 ntBASIC13.32□□□□□ -0.28
FOXG1P55316 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXG1P55316 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXG1P55316 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.32□□□□□ -0.28
FOXG1P55316 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXG1P55316 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.32□□□□□ -0.28
FOXG1P55316 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
FOXG1P55316 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FOXG1P55316 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.32□□□□□ -0.28
FOXG1P55316 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
FOXG1P55316 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
FOXG1P55316 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXG1P55316 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.32□□□□□ -0.28
FOXG1P55316 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.32□□□□□ -0.28
FOXG1P55316 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FOXG1P55316 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.32□□□□□ -0.28
FOXG1P55316 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
FOXG1P55316 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
FOXG1P55316 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.32□□□□□ -0.28
FOXG1P55316 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.32□□□□□ -0.28
FOXG1P55316 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
FOXG1P55316 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXG1P55316 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXG1P55316 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXG1P55316 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXG1P55316 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
FOXG1P55316 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXG1P55316 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXG1P55316 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
FOXG1P55316 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXG1P55316 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXG1P55316 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FOXG1P55316 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
FOXG1P55316 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXG1P55316 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FOXG1P55316 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.31□□□□□ -0.28
FOXG1P55316 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXG1P55316 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXG1P55316 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXG1P55316 BOLA2P3-201ENST00000404566 256 ntBASIC13.31□□□□□ -0.28
FOXG1P55316 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.31□□□□□ -0.28
FOXG1P55316 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FOXG1P55316 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXG1P55316 KRT223P-202ENST00000449164 1292 ntBASIC13.31□□□□□ -0.28
FOXG1P55316 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
FOXG1P55316 FO681548.1-201ENST00000455617 1132 ntBASIC13.31□□□□□ -0.28
FOXG1P55316 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.31□□□□□ -0.28
FOXG1P55316 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.31□□□□□ -0.28
FOXG1P55316 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.31□□□□□ -0.28
FOXG1P55316 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FOXG1P55316 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.31□□□□□ -0.28
FOXG1P55316 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
FOXG1P55316 MIR6805-201ENST00000615055 62 ntBASIC13.31□□□□□ -0.28
FOXG1P55316 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXG1P55316 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
FOXG1P55316 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXG1P55316 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXG1P55316 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXG1P55316 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXG1P55316 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.31□□□□□ -0.28
FOXG1P55316 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXG1P55316 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FOXG1P55316 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
FOXG1P55316 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.31□□□□□ -0.28
FOXG1P55316 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FOXG1P55316 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FOXG1P55316 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms