Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.43□□□□□ -0.1
CLK1P49759 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.43□□□□□ -0.1
CLK1P49759 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 LINC01230-201ENST00000625222 3017 ntBASIC14.43□□□□□ -0.1
CLK1P49759 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.43□□□□□ -0.1
CLK1P49759 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.43□□□□□ -0.1
CLK1P49759 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.43□□□□□ -0.1
CLK1P49759 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.43□□□□□ -0.1
CLK1P49759 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.43□□□□□ -0.1
CLK1P49759 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.43□□□□□ -0.1
CLK1P49759 AL133215.2-201ENST00000609242 977 ntBASIC14.43□□□□□ -0.1
CLK1P49759 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.43□□□□□ -0.1
CLK1P49759 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.43□□□□□ -0.1
CLK1P49759 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CLK1P49759 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.43□□□□□ -0.1
CLK1P49759 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CLK1P49759 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.43□□□□□ -0.1
CLK1P49759 AC134407.2-201ENST00000625089 1978 ntBASIC14.43□□□□□ -0.1
CLK1P49759 KRT8P12-202ENST00000472924 1397 ntBASIC14.43□□□□□ -0.1
CLK1P49759 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.43□□□□□ -0.1
CLK1P49759 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.43□□□□□ -0.1
CLK1P49759 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CLK1P49759 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.43□□□□□ -0.1
CLK1P49759 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.43□□□□□ -0.1
CLK1P49759 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CLK1P49759 CETN4P-206ENST00000642099 2168 ntBASIC14.43□□□□□ -0.1
CLK1P49759 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.43□□□□□ -0.1
CLK1P49759 INTS4P1-203ENST00000641008 3683 ntBASIC14.43□□□□□ -0.1
CLK1P49759 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 AC131212.3-201ENST00000624087 4219 ntBASIC14.42□□□□□ -0.1
CLK1P49759 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CLK1P49759 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.42□□□□□ -0.1
CLK1P49759 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 AC148477.4-201ENST00000613430 1793 ntBASIC14.42□□□□□ -0.1
CLK1P49759 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.42□□□□□ -0.1
CLK1P49759 AC010327.5-201ENST00000586923 3061 ntBASIC14.42□□□□□ -0.1
CLK1P49759 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CLK1P49759 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.42□□□□□ -0.1
CLK1P49759 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CLK1P49759 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.42□□□□□ -0.1
CLK1P49759 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.42□□□□□ -0.1
CLK1P49759 PHKG1P2-201ENST00000457537 863 ntBASIC14.42□□□□□ -0.1
CLK1P49759 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 HLA-V-204ENST00000476601 1289 ntBASIC14.42□□□□□ -0.1
CLK1P49759 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.42□□□□□ -0.1
CLK1P49759 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.42□□□□□ -0.1
CLK1P49759 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.42□□□□□ -0.1
CLK1P49759 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.42□□□□□ -0.1
CLK1P49759 Z92544.3-201ENST00000624747 417 ntBASIC14.42□□□□□ -0.1
CLK1P49759 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.42□□□□□ -0.1
CLK1P49759 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.42□□□□□ -0.1
CLK1P49759 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.42□□□□□ -0.1
CLK1P49759 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CLK1P49759 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CLK1P49759 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CLK1P49759 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLK1P49759 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CLK1P49759 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms