Protein–RNA interactions for Protein: P46020

PHKA1, Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform, humanhuman

Predictions only

Length 1,223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHKA1P46020 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PHKA1P46020 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.3■□□□□ 0.52
PHKA1P46020 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.3■□□□□ 0.52
PHKA1P46020 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.3■□□□□ 0.52
PHKA1P46020 AC005730.2-201ENST00000564549 1184 ntBASIC18.3■□□□□ 0.52
PHKA1P46020 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.3■□□□□ 0.52
PHKA1P46020 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC18.3■□□□□ 0.52
PHKA1P46020 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.3■□□□□ 0.52
PHKA1P46020 AL022328.3-201ENST00000607943 679 ntBASIC18.3■□□□□ 0.52
PHKA1P46020 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PHKA1P46020 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.3■□□□□ 0.52
PHKA1P46020 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PHKA1P46020 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHKA1P46020 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC18.3■□□□□ 0.52
PHKA1P46020 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHKA1P46020 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHKA1P46020 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.3■□□□□ 0.52
PHKA1P46020 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.3■□□□□ 0.52
PHKA1P46020 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.3■□□□□ 0.52
PHKA1P46020 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHKA1P46020 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHKA1P46020 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHKA1P46020 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PHKA1P46020 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PHKA1P46020 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PHKA1P46020 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PHKA1P46020 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PHKA1P46020 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PHKA1P46020 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.29■□□□□ 0.52
PHKA1P46020 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PHKA1P46020 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PHKA1P46020 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PHKA1P46020 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PHKA1P46020 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PHKA1P46020 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PHKA1P46020 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PHKA1P46020 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
PHKA1P46020 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC18.29■□□□□ 0.52
PHKA1P46020 MIR4783-201ENST00000580343 82 ntBASIC18.29■□□□□ 0.52
PHKA1P46020 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PHKA1P46020 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PHKA1P46020 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PHKA1P46020 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.29■□□□□ 0.52
PHKA1P46020 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.29■□□□□ 0.52
PHKA1P46020 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PHKA1P46020 LINC00554-201ENST00000564841 3011 ntBASIC18.29■□□□□ 0.52
PHKA1P46020 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PHKA1P46020 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PHKA1P46020 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PHKA1P46020 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PHKA1P46020 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.29■□□□□ 0.52
PHKA1P46020 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PHKA1P46020 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PHKA1P46020 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PHKA1P46020 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PHKA1P46020 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.29■□□□□ 0.52
PHKA1P46020 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHKA1P46020 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PHKA1P46020 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHKA1P46020 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHKA1P46020 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHKA1P46020 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.28■□□□□ 0.52
PHKA1P46020 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
PHKA1P46020 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHKA1P46020 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PHKA1P46020 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PHKA1P46020 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHKA1P46020 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHKA1P46020 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHKA1P46020 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PHKA1P46020 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.28■□□□□ 0.52
PHKA1P46020 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHKA1P46020 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.28■□□□□ 0.52
PHKA1P46020 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PHKA1P46020 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PHKA1P46020 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PHKA1P46020 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC18.28■□□□□ 0.52
PHKA1P46020 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.28■□□□□ 0.52
PHKA1P46020 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18.28■□□□□ 0.52
PHKA1P46020 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PHKA1P46020 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHKA1P46020 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PHKA1P46020 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.28■□□□□ 0.52
PHKA1P46020 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.28■□□□□ 0.52
PHKA1P46020 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHKA1P46020 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHKA1P46020 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHKA1P46020 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PHKA1P46020 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PHKA1P46020 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PHKA1P46020 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.28■□□□□ 0.52
PHKA1P46020 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHKA1P46020 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.28■□□□□ 0.52
PHKA1P46020 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PHKA1P46020 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PHKA1P46020 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHKA1P46020 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.27■□□□□ 0.52
PHKA1P46020 AC003102.2-201ENST00000589195 1469 ntBASIC18.27■□□□□ 0.52
PHKA1P46020 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PHKA1P46020 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms