Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HMGCLP35914 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGCLP35914 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
HMGCLP35914 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGCLP35914 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGCLP35914 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.13■□□□□ 0.01
HMGCLP35914 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.13■□□□□ 0.01
HMGCLP35914 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
HMGCLP35914 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
HMGCLP35914 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.13■□□□□ 0.01
HMGCLP35914 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGCLP35914 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGCLP35914 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.13■□□□□ 0.01
HMGCLP35914 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGCLP35914 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.13■□□□□ 0.01
HMGCLP35914 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.13■□□□□ 0.01
HMGCLP35914 LINC01101-201ENST00000622953 1884 ntBASIC15.13■□□□□ 0.01
HMGCLP35914 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
HMGCLP35914 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGCLP35914 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCLP35914 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCLP35914 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.12■□□□□ 0.01
HMGCLP35914 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCLP35914 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.12■□□□□ 0.01
HMGCLP35914 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCLP35914 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
HMGCLP35914 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HMGCLP35914 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCLP35914 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCLP35914 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.12■□□□□ 0.01
HMGCLP35914 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCLP35914 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.12■□□□□ 0.01
HMGCLP35914 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCLP35914 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCLP35914 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCLP35914 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCLP35914 AC092933.1-201ENST00000393644 945 ntBASIC15.12■□□□□ 0.01
HMGCLP35914 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCLP35914 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.12■□□□□ 0.01
HMGCLP35914 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.12■□□□□ 0.01
HMGCLP35914 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
HMGCLP35914 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.12■□□□□ 0.01
HMGCLP35914 AC026434.2-201ENST00000506094 1078 ntBASIC15.12■□□□□ 0.01
HMGCLP35914 AC106760.1-201ENST00000508690 800 ntBASIC15.12■□□□□ 0.01
HMGCLP35914 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.12■□□□□ 0.01
HMGCLP35914 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.12■□□□□ 0.01
HMGCLP35914 GNRHR2-203ENST00000581100 1187 ntBASIC15.12■□□□□ 0.01
HMGCLP35914 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.12■□□□□ 0.01
HMGCLP35914 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.12■□□□□ 0.01
HMGCLP35914 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.12■□□□□ 0.01
HMGCLP35914 AC132938.4-201ENST00000623835 848 ntBASIC15.12■□□□□ 0.01
HMGCLP35914 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HMGCLP35914 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
HMGCLP35914 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCLP35914 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCLP35914 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCLP35914 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
HMGCLP35914 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCLP35914 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCLP35914 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.12■□□□□ 0.01
HMGCLP35914 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGCLP35914 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HMGCLP35914 LINC02228-204ENST00000642115 2962 ntBASIC15.12■□□□□ 0.01
HMGCLP35914 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HMGCLP35914 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.11■□□□□ 0.01
HMGCLP35914 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGCLP35914 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.11■□□□□ 0.01
HMGCLP35914 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HMGCLP35914 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.11■□□□□ 0.01
HMGCLP35914 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGCLP35914 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms