Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 CLK3P2-201ENST00000427566 1453 ntBASIC14.58□□□□□ -0.08
BCKDHAP12694 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BCKDHAP12694 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BCKDHAP12694 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
BCKDHAP12694 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BCKDHAP12694 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BCKDHAP12694 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
BCKDHAP12694 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BCKDHAP12694 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BCKDHAP12694 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.58□□□□□ -0.08
BCKDHAP12694 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BCKDHAP12694 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BCKDHAP12694 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.58□□□□□ -0.08
BCKDHAP12694 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.58□□□□□ -0.08
BCKDHAP12694 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
BCKDHAP12694 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.58□□□□□ -0.08
BCKDHAP12694 AL589987.1-201ENST00000453380 819 ntBASIC14.58□□□□□ -0.08
BCKDHAP12694 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.58□□□□□ -0.08
BCKDHAP12694 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.58□□□□□ -0.08
BCKDHAP12694 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.58□□□□□ -0.08
BCKDHAP12694 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
BCKDHAP12694 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.58□□□□□ -0.08
BCKDHAP12694 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
BCKDHAP12694 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.58□□□□□ -0.08
BCKDHAP12694 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BCKDHAP12694 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.58□□□□□ -0.08
BCKDHAP12694 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BCKDHAP12694 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
BCKDHAP12694 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BCKDHAP12694 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
BCKDHAP12694 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.58□□□□□ -0.08
BCKDHAP12694 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.58□□□□□ -0.08
BCKDHAP12694 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BCKDHAP12694 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BCKDHAP12694 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BCKDHAP12694 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BCKDHAP12694 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BCKDHAP12694 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BCKDHAP12694 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.58□□□□□ -0.08
BCKDHAP12694 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.58□□□□□ -0.08
BCKDHAP12694 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
BCKDHAP12694 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
BCKDHAP12694 AP001267.2-201ENST00000532619 2086 ntBASIC14.57□□□□□ -0.08
BCKDHAP12694 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
BCKDHAP12694 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.57□□□□□ -0.08
BCKDHAP12694 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.57□□□□□ -0.08
BCKDHAP12694 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.57□□□□□ -0.08
BCKDHAP12694 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.57□□□□□ -0.08
BCKDHAP12694 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.57□□□□□ -0.08
BCKDHAP12694 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.57□□□□□ -0.08
BCKDHAP12694 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.57□□□□□ -0.08
BCKDHAP12694 IGHV3-42-201ENST00000520410 361 ntBASIC14.57□□□□□ -0.08
BCKDHAP12694 DUX4L27-201ENST00000554796 1261 ntBASIC14.57□□□□□ -0.08
BCKDHAP12694 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.57□□□□□ -0.08
BCKDHAP12694 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
BCKDHAP12694 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.57□□□□□ -0.08
BCKDHAP12694 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.57□□□□□ -0.08
BCKDHAP12694 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
BCKDHAP12694 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
BCKDHAP12694 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BCKDHAP12694 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BCKDHAP12694 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BCKDHAP12694 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BCKDHAP12694 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
BCKDHAP12694 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BCKDHAP12694 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
BCKDHAP12694 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
BCKDHAP12694 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
BCKDHAP12694 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BCKDHAP12694 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.56□□□□□ -0.08
BCKDHAP12694 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
BCKDHAP12694 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BCKDHAP12694 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BCKDHAP12694 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
BCKDHAP12694 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.56□□□□□ -0.08
BCKDHAP12694 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BCKDHAP12694 AC117489.1-201ENST00000625169 3217 ntBASIC14.56□□□□□ -0.08
BCKDHAP12694 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms