Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPM3P06753 AP000845.1-201ENST00000581677 2131 ntBASIC17.15■□□□□ 0.34
TPM3P06753 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPM3P06753 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.15■□□□□ 0.34
TPM3P06753 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
TPM3P06753 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TPM3P06753 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TPM3P06753 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TPM3P06753 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPM3P06753 AC055811.4-201ENST00000624039 1754 ntBASIC17.15■□□□□ 0.34
TPM3P06753 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TPM3P06753 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TPM3P06753 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TPM3P06753 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC17.14■□□□□ 0.34
TPM3P06753 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TPM3P06753 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.14■□□□□ 0.33
TPM3P06753 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM3P06753 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC17.14■□□□□ 0.33
TPM3P06753 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM3P06753 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM3P06753 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM3P06753 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM3P06753 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM3P06753 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.14■□□□□ 0.33
TPM3P06753 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM3P06753 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM3P06753 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
TPM3P06753 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM3P06753 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TPM3P06753 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM3P06753 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
TPM3P06753 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.14■□□□□ 0.33
TPM3P06753 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TPM3P06753 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TPM3P06753 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.14■□□□□ 0.33
TPM3P06753 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.14■□□□□ 0.33
TPM3P06753 AL513190.1-201ENST00000621254 727 ntBASIC17.14■□□□□ 0.33
TPM3P06753 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM3P06753 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.14■□□□□ 0.33
TPM3P06753 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM3P06753 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
TPM3P06753 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM3P06753 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.14■□□□□ 0.33
TPM3P06753 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM3P06753 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM3P06753 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TPM3P06753 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM3P06753 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.14■□□□□ 0.33
TPM3P06753 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC17.14■□□□□ 0.33
TPM3P06753 CICP20-201ENST00000443330 2801 ntBASIC17.14■□□□□ 0.33
TPM3P06753 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.14■□□□□ 0.33
TPM3P06753 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM3P06753 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TPM3P06753 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.14■□□□□ 0.33
TPM3P06753 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TPM3P06753 AL031595.1-201ENST00000623969 4709 ntBASIC17.13■□□□□ 0.33
TPM3P06753 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.13■□□□□ 0.33
TPM3P06753 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TPM3P06753 DMBT1P1-203ENST00000636837 4628 ntBASIC17.13■□□□□ 0.33
TPM3P06753 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC17.13■□□□□ 0.33
TPM3P06753 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.13■□□□□ 0.33
TPM3P06753 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.13■□□□□ 0.33
TPM3P06753 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.13■□□□□ 0.33
TPM3P06753 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.13■□□□□ 0.33
TPM3P06753 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.13■□□□□ 0.33
TPM3P06753 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.13■□□□□ 0.33
TPM3P06753 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.13■□□□□ 0.33
TPM3P06753 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TPM3P06753 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.13■□□□□ 0.33
TPM3P06753 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TPM3P06753 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.13■□□□□ 0.33
TPM3P06753 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TPM3P06753 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TPM3P06753 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TPM3P06753 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms