Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 AC026150.2-201ENST00000564693 1156 ntBASIC15.3■□□□□ 0.04
CBX6O95503 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.3■□□□□ 0.04
CBX6O95503 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.3■□□□□ 0.04
CBX6O95503 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CBX6O95503 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.3■□□□□ 0.04
CBX6O95503 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.3■□□□□ 0.04
CBX6O95503 AL390754.1-201ENST00000619088 582 ntBASIC15.3■□□□□ 0.04
CBX6O95503 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.3■□□□□ 0.04
CBX6O95503 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.3■□□□□ 0.04
CBX6O95503 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CBX6O95503 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CBX6O95503 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.3■□□□□ 0.04
CBX6O95503 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.3■□□□□ 0.04
CBX6O95503 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX6O95503 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX6O95503 AC018529.2-202ENST00000611482 3087 ntBASIC15.3■□□□□ 0.04
CBX6O95503 COL6A4P2-202ENST00000504443 2753 ntBASIC15.3■□□□□ 0.04
CBX6O95503 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
CBX6O95503 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CBX6O95503 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX6O95503 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CBX6O95503 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CBX6O95503 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.29■□□□□ 0.04
CBX6O95503 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.29■□□□□ 0.04
CBX6O95503 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CBX6O95503 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CBX6O95503 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CBX6O95503 WASH3P-207ENST00000560956 1394 ntBASIC15.29■□□□□ 0.04
CBX6O95503 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
CBX6O95503 SPDYE7P-202ENST00000420373 878 ntBASIC15.29■□□□□ 0.04
CBX6O95503 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.29■□□□□ 0.04
CBX6O95503 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX6O95503 IGHV3-42-201ENST00000520410 361 ntBASIC15.29■□□□□ 0.04
CBX6O95503 KRT8P23-201ENST00000560090 1207 ntBASIC15.29■□□□□ 0.04
CBX6O95503 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX6O95503 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.29■□□□□ 0.04
CBX6O95503 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX6O95503 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.29■□□□□ 0.04
CBX6O95503 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX6O95503 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 AC073439.1-201ENST00000624121 1774 ntBASIC15.29■□□□□ 0.04
CBX6O95503 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX6O95503 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX6O95503 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX6O95503 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX6O95503 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.28■□□□□ 0.04
CBX6O95503 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CBX6O95503 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX6O95503 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX6O95503 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.28■□□□□ 0.04
CBX6O95503 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CBX6O95503 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX6O95503 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CBX6O95503 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.28■□□□□ 0.04
CBX6O95503 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX6O95503 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX6O95503 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX6O95503 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CBX6O95503 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CBX6O95503 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CBX6O95503 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX6O95503 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX6O95503 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.28■□□□□ 0.04
CBX6O95503 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CBX6O95503 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.28■□□□□ 0.04
CBX6O95503 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CBX6O95503 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.28■□□□□ 0.04
CBX6O95503 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.28■□□□□ 0.04
CBX6O95503 AP005018.1-201ENST00000525475 301 ntBASIC15.28■□□□□ 0.04
CBX6O95503 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.28■□□□□ 0.04
CBX6O95503 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.28■□□□□ 0.04
CBX6O95503 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.28■□□□□ 0.04
CBX6O95503 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.28■□□□□ 0.04
CBX6O95503 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.28■□□□□ 0.04
CBX6O95503 AL158211.3-201ENST00000607385 239 ntBASIC15.28■□□□□ 0.04
CBX6O95503 AC084121.4-201ENST00000641598 221 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms