Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.58□□□□□ -0.08
LCMT2O60294 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LCMT2O60294 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LCMT2O60294 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.58□□□□□ -0.08
LCMT2O60294 AC134312.5-201ENST00000568031 1313 ntBASIC14.58□□□□□ -0.08
LCMT2O60294 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.58□□□□□ -0.08
LCMT2O60294 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LCMT2O60294 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LCMT2O60294 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LCMT2O60294 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.58□□□□□ -0.08
LCMT2O60294 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.58□□□□□ -0.08
LCMT2O60294 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.58□□□□□ -0.08
LCMT2O60294 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.58□□□□□ -0.08
LCMT2O60294 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.58□□□□□ -0.08
LCMT2O60294 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LCMT2O60294 KRT8P14-201ENST00000414254 1442 ntBASIC14.58□□□□□ -0.08
LCMT2O60294 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LCMT2O60294 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
LCMT2O60294 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LCMT2O60294 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LCMT2O60294 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LCMT2O60294 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.57□□□□□ -0.08
LCMT2O60294 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LCMT2O60294 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LCMT2O60294 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.57□□□□□ -0.08
LCMT2O60294 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.57□□□□□ -0.08
LCMT2O60294 AC012441.1-201ENST00000446669 685 ntBASIC14.57□□□□□ -0.08
LCMT2O60294 AC068587.3-201ENST00000526613 355 ntBASIC14.57□□□□□ -0.08
LCMT2O60294 SLC25A47P1-201ENST00000531577 414 ntBASIC14.57□□□□□ -0.08
LCMT2O60294 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 PTP4A1P2-201ENST00000546033 454 ntBASIC14.57□□□□□ -0.08
LCMT2O60294 CR383656.12-201ENST00000549567 513 ntBASIC14.57□□□□□ -0.08
LCMT2O60294 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.57□□□□□ -0.08
LCMT2O60294 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 AC008735.3-201ENST00000596646 500 ntBASIC14.57□□□□□ -0.08
LCMT2O60294 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.57□□□□□ -0.08
LCMT2O60294 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LCMT2O60294 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LCMT2O60294 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LCMT2O60294 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
LCMT2O60294 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LCMT2O60294 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LCMT2O60294 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.57□□□□□ -0.08
LCMT2O60294 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.57□□□□□ -0.08
LCMT2O60294 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
LCMT2O60294 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
LCMT2O60294 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.56□□□□□ -0.08
LCMT2O60294 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.56□□□□□ -0.08
LCMT2O60294 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.56□□□□□ -0.08
LCMT2O60294 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LCMT2O60294 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.56□□□□□ -0.08
LCMT2O60294 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
LCMT2O60294 EIF3FP3-201ENST00000434851 1086 ntBASIC14.56□□□□□ -0.08
LCMT2O60294 TTTY23B-201ENST00000442790 549 ntBASIC14.56□□□□□ -0.08
LCMT2O60294 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.56□□□□□ -0.08
LCMT2O60294 USP32P1-208ENST00000506594 1164 ntBASIC14.56□□□□□ -0.08
LCMT2O60294 AP001889.1-201ENST00000525414 633 ntBASIC14.56□□□□□ -0.08
LCMT2O60294 DUX4L47-201ENST00000566374 394 ntBASIC14.56□□□□□ -0.08
LCMT2O60294 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.56□□□□□ -0.08
LCMT2O60294 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.56□□□□□ -0.08
LCMT2O60294 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.56□□□□□ -0.08
LCMT2O60294 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.56□□□□□ -0.08
LCMT2O60294 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.56□□□□□ -0.08
LCMT2O60294 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.56□□□□□ -0.08
LCMT2O60294 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LCMT2O60294 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms