Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.94□□□□□ -0.18
RNF13O43567 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.94□□□□□ -0.18
RNF13O43567 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.94□□□□□ -0.18
RNF13O43567 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 TOMM22P5-201ENST00000416399 439 ntBASIC13.94□□□□□ -0.18
RNF13O43567 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
RNF13O43567 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.94□□□□□ -0.18
RNF13O43567 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.94□□□□□ -0.18
RNF13O43567 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.94□□□□□ -0.18
RNF13O43567 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.94□□□□□ -0.18
RNF13O43567 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.94□□□□□ -0.18
RNF13O43567 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.94□□□□□ -0.18
RNF13O43567 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
RNF13O43567 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.94□□□□□ -0.18
RNF13O43567 AL844908.2-201ENST00000609461 460 ntBASIC13.94□□□□□ -0.18
RNF13O43567 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.94□□□□□ -0.18
RNF13O43567 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.94□□□□□ -0.18
RNF13O43567 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RNF13O43567 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RNF13O43567 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RNF13O43567 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
RNF13O43567 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.94□□□□□ -0.18
RNF13O43567 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RNF13O43567 WASH3P-207ENST00000560956 1394 ntBASIC13.94□□□□□ -0.18
RNF13O43567 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.94□□□□□ -0.18
RNF13O43567 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
RNF13O43567 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.94□□□□□ -0.18
RNF13O43567 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RNF13O43567 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF13O43567 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF13O43567 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF13O43567 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF13O43567 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RNF13O43567 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RNF13O43567 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF13O43567 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF13O43567 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF13O43567 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF13O43567 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF13O43567 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RNF13O43567 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RNF13O43567 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF13O43567 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF13O43567 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF13O43567 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF13O43567 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF13O43567 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF13O43567 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF13O43567 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RNF13O43567 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF13O43567 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF13O43567 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RNF13O43567 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF13O43567 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF13O43567 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF13O43567 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.93□□□□□ -0.18
RNF13O43567 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.93□□□□□ -0.18
RNF13O43567 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF13O43567 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF13O43567 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF13O43567 AC106028.4-201ENST00000614509 607 ntBASIC13.93□□□□□ -0.18
RNF13O43567 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.93□□□□□ -0.18
RNF13O43567 AC004461.2-201ENST00000629517 803 ntBASIC13.93□□□□□ -0.18
RNF13O43567 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF13O43567 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF13O43567 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF13O43567 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF13O43567 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF13O43567 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF13O43567 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
RNF13O43567 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF13O43567 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF13O43567 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF13O43567 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF13O43567 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF13O43567 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF13O43567 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF13O43567 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.92□□□□□ -0.18
RNF13O43567 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
RNF13O43567 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms