Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.68□□□□□ -0.22
TVP23AA6NH52 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.68□□□□□ -0.22
TVP23AA6NH52 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
TVP23AA6NH52 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TVP23AA6NH52 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.68□□□□□ -0.22
TVP23AA6NH52 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TVP23AA6NH52 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.68□□□□□ -0.22
TVP23AA6NH52 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TVP23AA6NH52 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.68□□□□□ -0.22
TVP23AA6NH52 CNN2P2-201ENST00000443536 909 ntBASIC13.68□□□□□ -0.22
TVP23AA6NH52 CNN2P3-201ENST00000450201 906 ntBASIC13.68□□□□□ -0.22
TVP23AA6NH52 AC027369.6-201ENST00000525520 931 ntBASIC13.68□□□□□ -0.22
TVP23AA6NH52 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.68□□□□□ -0.22
TVP23AA6NH52 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.68□□□□□ -0.22
TVP23AA6NH52 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TVP23AA6NH52 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.68□□□□□ -0.22
TVP23AA6NH52 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.68□□□□□ -0.22
TVP23AA6NH52 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.68□□□□□ -0.22
TVP23AA6NH52 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.68□□□□□ -0.22
TVP23AA6NH52 AL136317.3-201ENST00000618497 906 ntBASIC13.68□□□□□ -0.22
TVP23AA6NH52 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 MTHFR-210ENST00000641407 2387 ntBASIC13.68□□□□□ -0.22
TVP23AA6NH52 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
TVP23AA6NH52 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TVP23AA6NH52 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.67□□□□□ -0.22
TVP23AA6NH52 AC012508.2-201ENST00000567613 1472 ntBASIC13.67□□□□□ -0.22
TVP23AA6NH52 AC018529.2-202ENST00000611482 3087 ntBASIC13.67□□□□□ -0.22
TVP23AA6NH52 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TVP23AA6NH52 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.67□□□□□ -0.22
TVP23AA6NH52 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
TVP23AA6NH52 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.67□□□□□ -0.22
TVP23AA6NH52 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TVP23AA6NH52 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.67□□□□□ -0.22
TVP23AA6NH52 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.67□□□□□ -0.22
TVP23AA6NH52 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.67□□□□□ -0.22
TVP23AA6NH52 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.67□□□□□ -0.22
TVP23AA6NH52 AC069120.2-201ENST00000524091 540 ntBASIC13.67□□□□□ -0.22
TVP23AA6NH52 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.67□□□□□ -0.22
TVP23AA6NH52 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TVP23AA6NH52 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 AC044860.1-202ENST00000559481 777 ntBASIC13.67□□□□□ -0.22
TVP23AA6NH52 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
TVP23AA6NH52 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.67□□□□□ -0.22
TVP23AA6NH52 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.67□□□□□ -0.22
TVP23AA6NH52 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 GRK6P1-201ENST00000400595 1711 ntBASIC13.67□□□□□ -0.22
TVP23AA6NH52 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TVP23AA6NH52 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.67□□□□□ -0.22
TVP23AA6NH52 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TVP23AA6NH52 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms