Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RCCD1A6NED2 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
RCCD1A6NED2 MST1P2-201ENST00000457982 2291 ntBASIC16.21■□□□□ 0.19
RCCD1A6NED2 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RCCD1A6NED2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RCCD1A6NED2 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
RCCD1A6NED2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RCCD1A6NED2 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
RCCD1A6NED2 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RCCD1A6NED2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
RCCD1A6NED2 AL137783.1-201ENST00000623494 1896 ntBASIC16.2■□□□□ 0.18
RCCD1A6NED2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.2■□□□□ 0.18
RCCD1A6NED2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.2■□□□□ 0.18
RCCD1A6NED2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.2■□□□□ 0.18
RCCD1A6NED2 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.2■□□□□ 0.18
RCCD1A6NED2 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.2■□□□□ 0.18
RCCD1A6NED2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 RPSAP43-201ENST00000402237 625 ntBASIC16.2■□□□□ 0.18
RCCD1A6NED2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.2■□□□□ 0.18
RCCD1A6NED2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.2■□□□□ 0.18
RCCD1A6NED2 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 AC069262.1-201ENST00000539058 672 ntBASIC16.2■□□□□ 0.18
RCCD1A6NED2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.2■□□□□ 0.18
RCCD1A6NED2 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC16.2■□□□□ 0.18
RCCD1A6NED2 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
RCCD1A6NED2 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.2■□□□□ 0.18
RCCD1A6NED2 AC027612.4-201ENST00000605371 583 ntBASIC16.2■□□□□ 0.18
RCCD1A6NED2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 AC023511.2-201ENST00000618803 211 ntBASIC16.2■□□□□ 0.18
RCCD1A6NED2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.2■□□□□ 0.18
RCCD1A6NED2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.2■□□□□ 0.18
RCCD1A6NED2 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RCCD1A6NED2 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 AC018665.1-201ENST00000622927 1362 ntBASIC16.2■□□□□ 0.18
RCCD1A6NED2 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
RCCD1A6NED2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.2■□□□□ 0.18
RCCD1A6NED2 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RCCD1A6NED2 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.2■□□□□ 0.18
RCCD1A6NED2 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.2■□□□□ 0.18
RCCD1A6NED2 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RCCD1A6NED2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.2■□□□□ 0.18
RCCD1A6NED2 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RCCD1A6NED2 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RCCD1A6NED2 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.19■□□□□ 0.18
RCCD1A6NED2 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCCD1A6NED2 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RCCD1A6NED2 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCCD1A6NED2 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.19■□□□□ 0.18
RCCD1A6NED2 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RCCD1A6NED2 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCCD1A6NED2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCCD1A6NED2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCCD1A6NED2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCCD1A6NED2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RCCD1A6NED2 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCCD1A6NED2 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCCD1A6NED2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCCD1A6NED2 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCCD1A6NED2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RCCD1A6NED2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RCCD1A6NED2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RCCD1A6NED2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.19■□□□□ 0.18
RCCD1A6NED2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.19■□□□□ 0.18
RCCD1A6NED2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RCCD1A6NED2 AC044860.1-202ENST00000559481 777 ntBASIC16.19■□□□□ 0.18
RCCD1A6NED2 AP001542.1-201ENST00000591314 200 ntBASIC16.19■□□□□ 0.18
RCCD1A6NED2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RCCD1A6NED2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RCCD1A6NED2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.19■□□□□ 0.18
RCCD1A6NED2 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RCCD1A6NED2 AC012617.1-204ENST00000586340 2305 ntBASIC16.19■□□□□ 0.18
RCCD1A6NED2 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCCD1A6NED2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.19■□□□□ 0.18
RCCD1A6NED2 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC16.19■□□□□ 0.18
RCCD1A6NED2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms