Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 AQP6-203ENST00000551733 849 ntTSL 3 BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 AC009407.1-201ENST00000568958 598 ntBASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 AC005498.2-205ENST00000593218 784 ntBASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 RER1-203ENST00000378513 3000 ntTSL 3 BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DRB4X5D2U9 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 AC008738.7-201ENST00000609744 511 ntBASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 AMT-224ENST00000635808 1610 ntTSL 5 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC11.56□□□□□ -0.56
HLA-DRB4X5D2U9 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 KRT8P44-201ENST00000441609 1350 ntBASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms