Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 FOXO1B-201ENST00000504678 1527 ntBASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4B1Q9Y6B7 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 TCAF1P1-201ENST00000414990 2232 ntBASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 AP3S2-216ENST00000617003 1561 ntBASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 AL645939.2-201ENST00000427340 991 ntBASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 SPDYE14P-201ENST00000442619 822 ntBASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 CNN2P2-201ENST00000443536 909 ntBASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 CNN2P3-201ENST00000450201 906 ntBASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 AC069262.1-201ENST00000539058 672 ntBASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 RARRES2P9-201ENST00000565168 469 ntBASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 AC015911.4-201ENST00000588022 1070 ntBASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 AL365330.1-201ENST00000607459 531 ntBASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 AL136317.3-201ENST00000618497 906 ntBASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 ACE3P-201ENST00000423435 1973 ntBASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 AC113367.3-201ENST00000508316 1912 ntBASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
AP4B1Q9Y6B7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 AC067863.1-201ENST00000494933 530 ntBASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.73□□□□□ -0.05
AP4B1Q9Y6B7 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms