Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 AP000347.1-202ENST00000435868 847 ntBASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 RBPMS2P1-201ENST00000437762 623 ntBASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGB4Q9UN71 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 HSPA7-201ENST00000445535 1927 ntBASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 AL627223.1-201ENST00000416693 442 ntBASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 MIR4469-201ENST00000583919 79 ntBASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 AL513210.1-201ENST00000629608 234 ntBASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PCDHGB4Q9UN71 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 AC089987.1-201ENST00000551654 2209 ntBASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms