Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RIMS3Q9UJD0 REXO1L4P-201ENST00000605109 1937 ntBASIC14.48□□□□□ -0.09
RIMS3Q9UJD0 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RIMS3Q9UJD0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RIMS3Q9UJD0 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
RIMS3Q9UJD0 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RIMS3Q9UJD0 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RIMS3Q9UJD0 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.48□□□□□ -0.09
RIMS3Q9UJD0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RIMS3Q9UJD0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RIMS3Q9UJD0 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
RIMS3Q9UJD0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 AC015818.8-201ENST00000587907 1519 ntBASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 OR2I1P-209ENST00000641730 5365 ntBASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 MKNK2P1-201ENST00000437526 628 ntBASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIMS3Q9UJD0 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 NUTM2HP-201ENST00000442076 2498 ntBASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 AZGP1P1-201ENST00000411909 902 ntBASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 AC004832.2-201ENST00000426397 482 ntBASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 HTR5BP-201ENST00000430851 1154 ntBASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 PGAM5P1-201ENST00000518923 814 ntBASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 AC055717.3-201ENST00000622967 595 ntBASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RIMS3Q9UJD0 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RIMS3Q9UJD0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.46□□□□□ -0.1
RIMS3Q9UJD0 PTENP1-202ENST00000532280 3996 ntBASIC14.46□□□□□ -0.1
RIMS3Q9UJD0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RIMS3Q9UJD0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
RIMS3Q9UJD0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RIMS3Q9UJD0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RIMS3Q9UJD0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RIMS3Q9UJD0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RIMS3Q9UJD0 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.46□□□□□ -0.1
RIMS3Q9UJD0 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RIMS3Q9UJD0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RIMS3Q9UJD0 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms