Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AC090164.2-201ENST00000611487 516 ntBASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 AC026691.1-201ENST00000602502 2017 ntBASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 MAGEA5-201ENST00000446757 942 ntBASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 AL161670.2-201ENST00000557650 1227 ntBASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 E2F3P2-201ENST00000447755 1422 ntBASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 AC008132.1-202ENST00000342005 1389 ntBASIC17.28■□□□□ 0.36
HOXC10Q9NYD6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 AL157791.1-201ENST00000553667 1699 ntBASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 AC012618.1-201ENST00000461223 412 ntBASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 RPL18P13-201ENST00000478088 569 ntBASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 AC125604.1-201ENST00000496255 707 ntBASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 SNORD3B-2-202ENST00000571722 791 ntBASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC10Q9NYD6 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC10Q9NYD6 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC10Q9NYD6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
HOXC10Q9NYD6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC10Q9NYD6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC10Q9NYD6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms