Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 DUTP3-201ENST00000450025 415 ntBASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 IGHV3-37-201ENST00000518544 340 ntBASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 RBM8B-201ENST00000555532 525 ntBASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 AC093752.3-201ENST00000567343 901 ntBASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 KRT8P31-201ENST00000504812 1408 ntBASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 AL583805.1-201ENST00000391389 531 ntBASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 BUD31-205ENST00000456893 512 ntTSL 5 BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 CHCHD2P9-201ENST00000461726 456 ntBASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC21.37■■□□□ 1.01
SLC52A1Q9NWF4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 AC007292.2-201ENST00000593524 1812 ntBASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 AC018629.1-201ENST00000623381 1736 ntBASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 TSPY25P-201ENST00000429463 745 ntBASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 RPSAP15-201ENST00000448168 861 ntBASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
SLC52A1Q9NWF4 KRT18P9-201ENST00000604826 1300 ntBASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 AL513523.2-202ENST00000427283 2040 ntBASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms