Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 DRD5P1-201ENST00000456605 1438 ntBASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 AC004449.1-201ENST00000564240 433 ntBASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 AC023090.2-201ENST00000625182 2110 ntBASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 CLK3P2-201ENST00000427566 1453 ntBASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.18□□□□□ -0.14
TMEM38AQ9H6F2 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 AL161772.1-201ENST00000610494 4412 ntBASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 AC152010.1-201ENST00000415779 2006 ntBASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM38AQ9H6F2 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms