Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 CETN4P-206ENST00000642099 2168 ntBASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 AC015922.1-201ENST00000421102 1152 ntBASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 AP000344.2-201ENST00000512987 629 ntBASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 AC004835.2-201ENST00000603762 682 ntBASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 AL121723.1-201ENST00000445194 1519 ntBASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 RPL37AP1-201ENST00000412502 279 ntBASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 RPL13P2-201ENST00000440687 659 ntBASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 DNAJB3-201ENST00000446806 729 ntBASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 AC023141.5-201ENST00000458585 616 ntBASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 AC010327.4-202ENST00000591484 748 ntBASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms