Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 AL133215.2-201ENST00000609242 977 ntBASIC14.89□□□□□ -0.03
EBF4Q9BQW3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 AL354702.1-201ENST00000442006 1960 ntBASIC14.89□□□□□ -0.03
EBF4Q9BQW3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 MIR600HG-201ENST00000449175 5984 ntBASIC14.88□□□□□ -0.03
EBF4Q9BQW3 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 AL450487.1-201ENST00000426799 995 ntBASIC14.88□□□□□ -0.03
EBF4Q9BQW3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 AL592309.1-201ENST00000443127 649 ntBASIC14.88□□□□□ -0.03
EBF4Q9BQW3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 AC140113.2-201ENST00000604370 208 ntBASIC14.88□□□□□ -0.03
EBF4Q9BQW3 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.88□□□□□ -0.03
EBF4Q9BQW3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 CICP8-201ENST00000455800 2813 ntBASIC14.87□□□□□ -0.03
EBF4Q9BQW3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 AC105206.1-202ENST00000314927 2368 ntBASIC14.87□□□□□ -0.03
EBF4Q9BQW3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 AC023274.1-201ENST00000418278 595 ntBASIC14.87□□□□□ -0.03
EBF4Q9BQW3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 KRT18P3-201ENST00000451602 1288 ntBASIC14.87□□□□□ -0.03
EBF4Q9BQW3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.87□□□□□ -0.03
EBF4Q9BQW3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms