Protein–RNA interactions for Protein: Q99435

NELL2, Protein kinase C-binding protein NELL2, humanhuman

Predictions only

Length 816 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELL2Q99435 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.42■□□□□ 0.06
NELL2Q99435 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.42■□□□□ 0.06
NELL2Q99435 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELL2Q99435 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELL2Q99435 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
NELL2Q99435 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELL2Q99435 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
NELL2Q99435 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELL2Q99435 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.42■□□□□ 0.06
NELL2Q99435 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NELL2Q99435 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.42■□□□□ 0.06
NELL2Q99435 AC125604.1-201ENST00000496255 707 ntBASIC15.42■□□□□ 0.06
NELL2Q99435 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.42■□□□□ 0.06
NELL2Q99435 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.42■□□□□ 0.06
NELL2Q99435 AP003171.2-201ENST00000528208 925 ntBASIC15.42■□□□□ 0.06
NELL2Q99435 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.42■□□□□ 0.06
NELL2Q99435 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.42■□□□□ 0.06
NELL2Q99435 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NELL2Q99435 AC068587.8-201ENST00000641239 219 ntBASIC15.42■□□□□ 0.06
NELL2Q99435 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELL2Q99435 NFIC-211ENST00000641145 8399 ntBASIC15.42■□□□□ 0.06
NELL2Q99435 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
NELL2Q99435 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELL2Q99435 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELL2Q99435 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.42■□□□□ 0.06
NELL2Q99435 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NELL2Q99435 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
NELL2Q99435 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NELL2Q99435 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELL2Q99435 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
NELL2Q99435 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NELL2Q99435 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NELL2Q99435 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.42■□□□□ 0.06
NELL2Q99435 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.41■□□□□ 0.06
NELL2Q99435 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.41■□□□□ 0.06
NELL2Q99435 AC092364.2-201ENST00000596710 2692 ntBASIC15.41■□□□□ 0.06
NELL2Q99435 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.41■□□□□ 0.06
NELL2Q99435 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
NELL2Q99435 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NELL2Q99435 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
NELL2Q99435 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.41■□□□□ 0.06
NELL2Q99435 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.41■□□□□ 0.06
NELL2Q99435 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NELL2Q99435 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
NELL2Q99435 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
NELL2Q99435 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NELL2Q99435 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.41■□□□□ 0.06
NELL2Q99435 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NELL2Q99435 ACTG1P2-201ENST00000415776 1125 ntBASIC15.41■□□□□ 0.06
NELL2Q99435 ACTG1P11-201ENST00000425411 1125 ntBASIC15.41■□□□□ 0.06
NELL2Q99435 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.41■□□□□ 0.06
NELL2Q99435 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.41■□□□□ 0.06
NELL2Q99435 MIR3147-201ENST00000577811 66 ntBASIC15.41■□□□□ 0.06
NELL2Q99435 MIR4750-201ENST00000584564 56 ntBASIC15.41■□□□□ 0.06
NELL2Q99435 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NELL2Q99435 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
NELL2Q99435 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NELL2Q99435 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.41■□□□□ 0.06
NELL2Q99435 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NELL2Q99435 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NELL2Q99435 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NELL2Q99435 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NELL2Q99435 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.4■□□□□ 0.06
NELL2Q99435 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.4■□□□□ 0.06
NELL2Q99435 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NELL2Q99435 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NELL2Q99435 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NELL2Q99435 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NELL2Q99435 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
NELL2Q99435 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NELL2Q99435 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NELL2Q99435 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NELL2Q99435 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.4■□□□□ 0.06
NELL2Q99435 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NELL2Q99435 RN7SKP214-201ENST00000364208 315 ntBASIC15.4■□□□□ 0.06
NELL2Q99435 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms