Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC130686.1-201ENST00000622936 2466 ntBASIC13.49□□□□□ -0.25
AP3S1Q92572 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
AP3S1Q92572 AC105206.1-202ENST00000314927 2368 ntBASIC13.49□□□□□ -0.25
AP3S1Q92572 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
AP3S1Q92572 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.49□□□□□ -0.25
AP3S1Q92572 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.49□□□□□ -0.25
AP3S1Q92572 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.49□□□□□ -0.25
AP3S1Q92572 AC108073.2-201ENST00000464002 357 ntBASIC13.49□□□□□ -0.25
AP3S1Q92572 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.49□□□□□ -0.25
AP3S1Q92572 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.49□□□□□ -0.25
AP3S1Q92572 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.49□□□□□ -0.25
AP3S1Q92572 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.49□□□□□ -0.25
AP3S1Q92572 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.49□□□□□ -0.25
AP3S1Q92572 AC021087.4-201ENST00000563761 564 ntBASIC13.49□□□□□ -0.25
AP3S1Q92572 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 AC004790.2-201ENST00000623588 572 ntBASIC13.49□□□□□ -0.25
AP3S1Q92572 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.49□□□□□ -0.25
AP3S1Q92572 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.49□□□□□ -0.25
AP3S1Q92572 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.49□□□□□ -0.25
AP3S1Q92572 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.49□□□□□ -0.25
AP3S1Q92572 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
AP3S1Q92572 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.49□□□□□ -0.25
AP3S1Q92572 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.49□□□□□ -0.25
AP3S1Q92572 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 KRT8P24-201ENST00000560290 1559 ntBASIC13.49□□□□□ -0.25
AP3S1Q92572 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
AP3S1Q92572 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
AP3S1Q92572 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.48□□□□□ -0.25
AP3S1Q92572 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
AP3S1Q92572 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.48□□□□□ -0.25
AP3S1Q92572 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.48□□□□□ -0.25
AP3S1Q92572 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
AP3S1Q92572 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.48□□□□□ -0.25
AP3S1Q92572 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.48□□□□□ -0.25
AP3S1Q92572 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.48□□□□□ -0.25
AP3S1Q92572 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.48□□□□□ -0.25
AP3S1Q92572 AC004945.1-201ENST00000416738 983 ntBASIC13.48□□□□□ -0.25
AP3S1Q92572 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.48□□□□□ -0.25
AP3S1Q92572 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
AP3S1Q92572 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.48□□□□□ -0.25
AP3S1Q92572 TMEM198B-204ENST00000484016 896 ntBASIC13.48□□□□□ -0.25
AP3S1Q92572 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.48□□□□□ -0.25
AP3S1Q92572 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
AP3S1Q92572 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
AP3S1Q92572 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.48□□□□□ -0.25
AP3S1Q92572 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.48□□□□□ -0.25
AP3S1Q92572 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.48□□□□□ -0.25
AP3S1Q92572 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.48□□□□□ -0.25
AP3S1Q92572 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.48□□□□□ -0.25
AP3S1Q92572 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
AP3S1Q92572 CYP4F24P-201ENST00000586049 1580 ntBASIC13.48□□□□□ -0.25
AP3S1Q92572 AL607033.1-201ENST00000623900 1599 ntBASIC13.48□□□□□ -0.25
AP3S1Q92572 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms