Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
U2AF1L4Q8WU68 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.44■□□□□ 0.38
U2AF1L4Q8WU68 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.44■□□□□ 0.38
U2AF1L4Q8WU68 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
U2AF1L4Q8WU68 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.44■□□□□ 0.38
U2AF1L4Q8WU68 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2AF1L4Q8WU68 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
U2AF1L4Q8WU68 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
U2AF1L4Q8WU68 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2AF1L4Q8WU68 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2AF1L4Q8WU68 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
U2AF1L4Q8WU68 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2AF1L4Q8WU68 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
U2AF1L4Q8WU68 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2AF1L4Q8WU68 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.44■□□□□ 0.38
U2AF1L4Q8WU68 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 MIR3147-201ENST00000577811 66 ntBASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 RN7SL48P-201ENST00000579283 293 ntBASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 HLA-C-210ENST00000640219 976 ntBASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2AF1L4Q8WU68 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 NUP210P1-202ENST00000504322 710 ntBASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 GAPDHP40-201ENST00000505218 1006 ntBASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 AC024681.1-201ENST00000521917 487 ntBASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 BX539320.1-201ENST00000623759 877 ntBASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 REXO1L1P-202ENST00000608646 1974 ntBASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 AL138799.1-201ENST00000448213 1675 ntBASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.42■□□□□ 0.38
U2AF1L4Q8WU68 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
U2AF1L4Q8WU68 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.41■□□□□ 0.38
U2AF1L4Q8WU68 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
U2AF1L4Q8WU68 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
U2AF1L4Q8WU68 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.41■□□□□ 0.38
U2AF1L4Q8WU68 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
U2AF1L4Q8WU68 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
U2AF1L4Q8WU68 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
U2AF1L4Q8WU68 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
U2AF1L4Q8WU68 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.41■□□□□ 0.38
U2AF1L4Q8WU68 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
U2AF1L4Q8WU68 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.41■□□□□ 0.38
U2AF1L4Q8WU68 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.41■□□□□ 0.38
U2AF1L4Q8WU68 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
U2AF1L4Q8WU68 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
U2AF1L4Q8WU68 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
U2AF1L4Q8WU68 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
U2AF1L4Q8WU68 ACTBP8-201ENST00000403258 1108 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms