Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 AC073439.1-201ENST00000624121 1774 ntBASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 KRT18P34-201ENST00000488218 1270 ntBASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 CXCL1P1-201ENST00000502804 216 ntBASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 OR7E14P-202ENST00000530490 1290 ntBASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 PCDHB18P-202ENST00000526308 3197 ntBASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD2Q8IV50 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 GHSR-202ENST00000427970 912 ntBASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 RPS2P1-201ENST00000434010 821 ntBASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 AC243562.2-201ENST00000561247 970 ntBASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 AL358472.4-201ENST00000633140 710 ntBASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms