Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 AL161772.1-201ENST00000610494 4412 ntBASIC16.21■□□□□ 0.19
RNF135Q8IUD6 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 SLED1-202ENST00000512051 380 ntBASIC16.21■□□□□ 0.19
RNF135Q8IUD6 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 AC093813.1-201ENST00000605066 256 ntBASIC16.21■□□□□ 0.19
RNF135Q8IUD6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF135Q8IUD6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.21■□□□□ 0.18
RNF135Q8IUD6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
RNF135Q8IUD6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.21■□□□□ 0.18
RNF135Q8IUD6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.21■□□□□ 0.18
RNF135Q8IUD6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
RNF135Q8IUD6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
RNF135Q8IUD6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RNF135Q8IUD6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RNF135Q8IUD6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 AC112504.1-201ENST00000623415 1841 ntBASIC16.2■□□□□ 0.18
RNF135Q8IUD6 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.2■□□□□ 0.18
RNF135Q8IUD6 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 COX5BP1-201ENST00000507622 393 ntBASIC16.2■□□□□ 0.18
RNF135Q8IUD6 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 AC026410.3-201ENST00000514280 936 ntBASIC16.2■□□□□ 0.18
RNF135Q8IUD6 RNA5SP486-201ENST00000515961 83 ntBASIC16.2■□□□□ 0.18
RNF135Q8IUD6 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 AC006453.4-201ENST00000636949 1252 ntBASIC16.2■□□□□ 0.18
RNF135Q8IUD6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF135Q8IUD6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms