Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.33□□□□□ -0.28
CLDN12P56749 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.33□□□□□ -0.28
CLDN12P56749 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.33□□□□□ -0.28
CLDN12P56749 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
CLDN12P56749 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CLDN12P56749 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CLDN12P56749 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
CLDN12P56749 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CLDN12P56749 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.33□□□□□ -0.28
CLDN12P56749 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN12P56749 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CLDN12P56749 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.33□□□□□ -0.28
CLDN12P56749 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN12P56749 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
CLDN12P56749 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CLDN12P56749 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.32□□□□□ -0.28
CLDN12P56749 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN12P56749 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CLDN12P56749 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.32□□□□□ -0.28
CLDN12P56749 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CLDN12P56749 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CLDN12P56749 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CLDN12P56749 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CLDN12P56749 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CLDN12P56749 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CLDN12P56749 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN12P56749 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN12P56749 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN12P56749 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN12P56749 FAAHP1-202ENST00000446499 1238 ntBASIC13.32□□□□□ -0.28
CLDN12P56749 RN7SL589P-201ENST00000481268 310 ntBASIC13.32□□□□□ -0.28
CLDN12P56749 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN12P56749 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.32□□□□□ -0.28
CLDN12P56749 IGHV3-62-201ENST00000520057 340 ntBASIC13.32□□□□□ -0.28
CLDN12P56749 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.32□□□□□ -0.28
CLDN12P56749 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 LINC01225-203ENST00000563550 1244 ntBASIC13.32□□□□□ -0.28
CLDN12P56749 SLC25A6P4-201ENST00000586535 553 ntBASIC13.32□□□□□ -0.28
CLDN12P56749 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CLDN12P56749 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.32□□□□□ -0.28
CLDN12P56749 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CLDN12P56749 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.32□□□□□ -0.28
CLDN12P56749 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN12P56749 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN12P56749 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CLDN12P56749 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CLDN12P56749 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN12P56749 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CLDN12P56749 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CLDN12P56749 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.31□□□□□ -0.28
CLDN12P56749 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CLDN12P56749 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CLDN12P56749 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CLDN12P56749 AC138969.3-201ENST00000546612 1459 ntBASIC13.31□□□□□ -0.28
CLDN12P56749 AC138932.2-201ENST00000548268 1459 ntBASIC13.31□□□□□ -0.28
CLDN12P56749 AC126755.4-201ENST00000549796 1459 ntBASIC13.31□□□□□ -0.28
CLDN12P56749 AC089987.1-201ENST00000551654 2209 ntBASIC13.31□□□□□ -0.28
CLDN12P56749 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.31□□□□□ -0.28
CLDN12P56749 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.31□□□□□ -0.28
CLDN12P56749 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 UXT-AS1-201ENST00000590504 1525 ntBASIC13.31□□□□□ -0.28
CLDN12P56749 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms