Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDH8P55286 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH8P55286 AC055811.4-201ENST00000624039 1754 ntBASIC16.24■□□□□ 0.19
CDH8P55286 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.24■□□□□ 0.19
CDH8P55286 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CDH8P55286 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.24■□□□□ 0.19
CDH8P55286 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.24■□□□□ 0.19
CDH8P55286 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.24■□□□□ 0.19
CDH8P55286 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.24■□□□□ 0.19
CDH8P55286 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 RAB43P1-201ENST00000561790 589 ntBASIC16.24■□□□□ 0.19
CDH8P55286 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH8P55286 AC004466.1-201ENST00000599515 1080 ntBASIC16.24■□□□□ 0.19
CDH8P55286 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH8P55286 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDH8P55286 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH8P55286 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH8P55286 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CDH8P55286 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH8P55286 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CDH8P55286 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CDH8P55286 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH8P55286 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH8P55286 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH8P55286 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.23■□□□□ 0.19
CDH8P55286 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.23■□□□□ 0.19
CDH8P55286 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CDH8P55286 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH8P55286 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CDH8P55286 AC007551.1-201ENST00000457394 519 ntBASIC16.23■□□□□ 0.19
CDH8P55286 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CDH8P55286 DUX4L47-201ENST00000566374 394 ntBASIC16.23■□□□□ 0.19
CDH8P55286 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.23■□□□□ 0.19
CDH8P55286 AC106886.1-201ENST00000568660 600 ntBASIC16.23■□□□□ 0.19
CDH8P55286 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH8P55286 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH8P55286 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.23■□□□□ 0.19
CDH8P55286 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 NFIC-211ENST00000641145 8399 ntBASIC16.23■□□□□ 0.19
CDH8P55286 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH8P55286 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH8P55286 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CDH8P55286 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDH8P55286 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH8P55286 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CDH8P55286 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH8P55286 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH8P55286 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH8P55286 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH8P55286 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH8P55286 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH8P55286 TNRC18P2-201ENST00000417666 2714 ntBASIC16.22■□□□□ 0.19
CDH8P55286 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH8P55286 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CDH8P55286 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms