Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CACNB3P54284 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.9■□□□□ 0.46
CACNB3P54284 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.9■□□□□ 0.46
CACNB3P54284 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CACNB3P54284 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CACNB3P54284 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.9■□□□□ 0.46
CACNB3P54284 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CACNB3P54284 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CACNB3P54284 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CACNB3P54284 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.9■□□□□ 0.46
CACNB3P54284 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CACNB3P54284 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CACNB3P54284 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CACNB3P54284 SHC1P1-201ENST00000425230 1745 ntBASIC17.89■□□□□ 0.46
CACNB3P54284 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CACNB3P54284 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CACNB3P54284 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CACNB3P54284 AL365203.3-201ENST00000609742 2057 ntBASIC17.89■□□□□ 0.45
CACNB3P54284 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.89■□□□□ 0.45
CACNB3P54284 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CACNB3P54284 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CACNB3P54284 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.89■□□□□ 0.45
CACNB3P54284 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.89■□□□□ 0.45
CACNB3P54284 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CACNB3P54284 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.89■□□□□ 0.45
CACNB3P54284 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CACNB3P54284 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CACNB3P54284 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.89■□□□□ 0.45
CACNB3P54284 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CACNB3P54284 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.89■□□□□ 0.45
CACNB3P54284 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CACNB3P54284 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CACNB3P54284 KLF2P1-201ENST00000447438 1042 ntBASIC17.89■□□□□ 0.45
CACNB3P54284 RPL18P13-201ENST00000478088 569 ntBASIC17.89■□□□□ 0.45
CACNB3P54284 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.89■□□□□ 0.45
CACNB3P54284 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.89■□□□□ 0.45
CACNB3P54284 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.89■□□□□ 0.45
CACNB3P54284 MIR3907-201ENST00000579424 151 ntBASIC17.89■□□□□ 0.45
CACNB3P54284 RN7SL163P-201ENST00000583100 276 ntBASIC17.89■□□□□ 0.45
CACNB3P54284 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CACNB3P54284 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CACNB3P54284 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CACNB3P54284 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CACNB3P54284 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CACNB3P54284 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CACNB3P54284 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.89■□□□□ 0.45
CACNB3P54284 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CACNB3P54284 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CACNB3P54284 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.89■□□□□ 0.45
CACNB3P54284 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CACNB3P54284 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.89■□□□□ 0.45
CACNB3P54284 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.88■□□□□ 0.45
CACNB3P54284 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.88■□□□□ 0.45
CACNB3P54284 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CACNB3P54284 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNB3P54284 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNB3P54284 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CACNB3P54284 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.88■□□□□ 0.45
CACNB3P54284 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.88■□□□□ 0.45
CACNB3P54284 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CACNB3P54284 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.88■□□□□ 0.45
CACNB3P54284 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CACNB3P54284 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.88■□□□□ 0.45
CACNB3P54284 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.88■□□□□ 0.45
CACNB3P54284 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.88■□□□□ 0.45
CACNB3P54284 AC090164.2-201ENST00000611487 516 ntBASIC17.88■□□□□ 0.45
CACNB3P54284 AL805961.1-203ENST00000641078 1258 ntBASIC17.88■□□□□ 0.45
CACNB3P54284 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CACNB3P54284 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CACNB3P54284 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNB3P54284 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CACNB3P54284 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNB3P54284 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CACNB3P54284 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.88■□□□□ 0.45
CACNB3P54284 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.88■□□□□ 0.45
CACNB3P54284 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNB3P54284 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNB3P54284 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CACNB3P54284 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNB3P54284 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CACNB3P54284 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNB3P54284 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNB3P54284 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CACNB3P54284 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNB3P54284 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CACNB3P54284 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.87■□□□□ 0.45
CACNB3P54284 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CACNB3P54284 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CACNB3P54284 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CACNB3P54284 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.87■□□□□ 0.45
CACNB3P54284 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.87■□□□□ 0.45
CACNB3P54284 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNB3P54284 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNB3P54284 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CACNB3P54284 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNB3P54284 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CACNB3P54284 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CACNB3P54284 TUBB8P8-201ENST00000458717 1058 ntBASIC17.87■□□□□ 0.45
CACNB3P54284 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CACNB3P54284 AL160314.3-201ENST00000556041 767 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms