Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.65□□□□□ -0.38
SNCAP37840 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.65□□□□□ -0.38
SNCAP37840 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
SNCAP37840 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SNCAP37840 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SNCAP37840 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.64□□□□□ -0.39
SNCAP37840 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.64□□□□□ -0.39
SNCAP37840 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.64□□□□□ -0.39
SNCAP37840 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.64□□□□□ -0.39
SNCAP37840 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.64□□□□□ -0.39
SNCAP37840 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SNCAP37840 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SNCAP37840 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.64□□□□□ -0.39
SNCAP37840 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.64□□□□□ -0.39
SNCAP37840 TFAMP1-201ENST00000412727 736 ntBASIC12.64□□□□□ -0.39
SNCAP37840 AL645939.2-201ENST00000427340 991 ntBASIC12.64□□□□□ -0.39
SNCAP37840 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SNCAP37840 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.64□□□□□ -0.39
SNCAP37840 AC009078.2-202ENST00000463353 338 ntBASIC12.64□□□□□ -0.39
SNCAP37840 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.64□□□□□ -0.39
SNCAP37840 IGHV3-62-201ENST00000520057 340 ntBASIC12.64□□□□□ -0.39
SNCAP37840 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.64□□□□□ -0.39
SNCAP37840 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.64□□□□□ -0.39
SNCAP37840 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.64□□□□□ -0.39
SNCAP37840 AL135744.1-201ENST00000565098 629 ntBASIC12.64□□□□□ -0.39
SNCAP37840 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.64□□□□□ -0.39
SNCAP37840 AL513190.1-201ENST00000621254 727 ntBASIC12.64□□□□□ -0.39
SNCAP37840 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.64□□□□□ -0.39
SNCAP37840 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SNCAP37840 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SNCAP37840 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.64□□□□□ -0.39
SNCAP37840 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 AC127383.1-201ENST00000444697 1800 ntBASIC12.64□□□□□ -0.39
SNCAP37840 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SNCAP37840 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SNCAP37840 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SNCAP37840 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
SNCAP37840 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.64□□□□□ -0.39
SNCAP37840 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SNCAP37840 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
SNCAP37840 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNCAP37840 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.64□□□□□ -0.39
SNCAP37840 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SNCAP37840 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.63□□□□□ -0.39
SNCAP37840 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SNCAP37840 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.63□□□□□ -0.39
SNCAP37840 CR383656.2-201ENST00000548656 2254 ntBASIC12.63□□□□□ -0.39
SNCAP37840 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
SNCAP37840 AC097359.2-201ENST00000604992 2389 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 210.1 ms