Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
ERCC2P18074 AP006294.1-201ENST00000415407 339 ntBASIC15.69■□□□□ 0.1
ERCC2P18074 AC114812.1-204ENST00000449669 728 ntBASIC15.69■□□□□ 0.1
ERCC2P18074 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ERCC2P18074 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.69■□□□□ 0.1
ERCC2P18074 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.69■□□□□ 0.1
ERCC2P18074 AP001063.1-201ENST00000568332 529 ntBASIC15.69■□□□□ 0.1
ERCC2P18074 AP005019.2-201ENST00000615104 511 ntBASIC15.69■□□□□ 0.1
ERCC2P18074 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.69■□□□□ 0.1
ERCC2P18074 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
ERCC2P18074 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.69■□□□□ 0.1
ERCC2P18074 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
ERCC2P18074 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
ERCC2P18074 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC2P18074 KRT8P14-201ENST00000414254 1442 ntBASIC15.68■□□□□ 0.1
ERCC2P18074 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC2P18074 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC2P18074 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ERCC2P18074 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ERCC2P18074 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
ERCC2P18074 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC2P18074 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ERCC2P18074 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.68■□□□□ 0.1
ERCC2P18074 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC2P18074 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC2P18074 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC2P18074 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC2P18074 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC2P18074 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC2P18074 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
ERCC2P18074 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC2P18074 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC2P18074 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.68■□□□□ 0.1
ERCC2P18074 ACKR1-201ENST00000368121 1240 ntBASIC15.68■□□□□ 0.1
ERCC2P18074 AC098614.1-201ENST00000368528 745 ntBASIC15.68■□□□□ 0.1
ERCC2P18074 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.68■□□□□ 0.1
ERCC2P18074 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.68■□□□□ 0.1
ERCC2P18074 KLF2P2-201ENST00000416807 1039 ntBASIC15.68■□□□□ 0.1
ERCC2P18074 AC093433.1-201ENST00000458048 571 ntBASIC15.68■□□□□ 0.1
ERCC2P18074 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC2P18074 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.68■□□□□ 0.1
ERCC2P18074 RPSAP52-203ENST00000622976 1023 ntBASIC15.68■□□□□ 0.1
ERCC2P18074 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC2P18074 CICP23-201ENST00000605013 2741 ntBASIC15.68■□□□□ 0.1
ERCC2P18074 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.68■□□□□ 0.1
ERCC2P18074 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC2P18074 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC2P18074 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.68■□□□□ 0.1
ERCC2P18074 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
ERCC2P18074 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC2P18074 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC2P18074 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC2P18074 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC2P18074 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC2P18074 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.67■□□□□ 0.1
ERCC2P18074 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 LINC01101-201ENST00000622953 1884 ntBASIC15.67■□□□□ 0.1
ERCC2P18074 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.67■□□□□ 0.1
ERCC2P18074 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.67■□□□□ 0.1
ERCC2P18074 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.67■□□□□ 0.1
ERCC2P18074 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ERCC2P18074 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ERCC2P18074 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.67■□□□□ 0.1
ERCC2P18074 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
ERCC2P18074 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.67■□□□□ 0.1
ERCC2P18074 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.67■□□□□ 0.1
ERCC2P18074 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.67■□□□□ 0.1
ERCC2P18074 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.67■□□□□ 0.1
ERCC2P18074 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.67■□□□□ 0.1
ERCC2P18074 AP005018.1-201ENST00000525475 301 ntBASIC15.67■□□□□ 0.1
ERCC2P18074 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.67■□□□□ 0.1
ERCC2P18074 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.67■□□□□ 0.1
ERCC2P18074 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.67■□□□□ 0.1
ERCC2P18074 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.67■□□□□ 0.1
ERCC2P18074 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.67■□□□□ 0.1
ERCC2P18074 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC2P18074 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms