Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 AL008721.1-201ENST00000609964 604 ntBASIC13.78□□□□□ -0.2
PPP3CBP16298 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PPP3CBP16298 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.78□□□□□ -0.2
PPP3CBP16298 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PPP3CBP16298 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PPP3CBP16298 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.78□□□□□ -0.2
PPP3CBP16298 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PPP3CBP16298 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
PPP3CBP16298 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.78□□□□□ -0.2
PPP3CBP16298 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.78□□□□□ -0.2
PPP3CBP16298 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PPP3CBP16298 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.78□□□□□ -0.2
PPP3CBP16298 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.78□□□□□ -0.2
PPP3CBP16298 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PPP3CBP16298 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PPP3CBP16298 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PPP3CBP16298 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.78□□□□□ -0.2
PPP3CBP16298 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.78□□□□□ -0.2
PPP3CBP16298 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
PPP3CBP16298 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.78□□□□□ -0.2
PPP3CBP16298 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PPP3CBP16298 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PPP3CBP16298 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PPP3CBP16298 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PPP3CBP16298 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PPP3CBP16298 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.78□□□□□ -0.2
PPP3CBP16298 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PPP3CBP16298 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.78□□□□□ -0.2
PPP3CBP16298 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
PPP3CBP16298 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PPP3CBP16298 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PPP3CBP16298 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
PPP3CBP16298 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PPP3CBP16298 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
PPP3CBP16298 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PPP3CBP16298 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
PPP3CBP16298 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PPP3CBP16298 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PPP3CBP16298 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.77□□□□□ -0.21
PPP3CBP16298 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PPP3CBP16298 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PPP3CBP16298 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PPP3CBP16298 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PPP3CBP16298 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.77□□□□□ -0.21
PPP3CBP16298 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.77□□□□□ -0.21
PPP3CBP16298 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PPP3CBP16298 BOLA2P3-201ENST00000404566 256 ntBASIC13.77□□□□□ -0.21
PPP3CBP16298 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
PPP3CBP16298 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.77□□□□□ -0.21
PPP3CBP16298 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PPP3CBP16298 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PPP3CBP16298 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.77□□□□□ -0.21
PPP3CBP16298 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PPP3CBP16298 FAM86LP-201ENST00000478302 853 ntBASIC13.77□□□□□ -0.21
PPP3CBP16298 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PPP3CBP16298 IGHV3-71-201ENST00000523324 359 ntBASIC13.77□□□□□ -0.21
PPP3CBP16298 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.77□□□□□ -0.21
PPP3CBP16298 ENPP7P5-201ENST00000541031 1031 ntBASIC13.77□□□□□ -0.21
PPP3CBP16298 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.77□□□□□ -0.21
PPP3CBP16298 RAB43P1-201ENST00000561790 589 ntBASIC13.77□□□□□ -0.21
PPP3CBP16298 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PPP3CBP16298 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PPP3CBP16298 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.77□□□□□ -0.21
PPP3CBP16298 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.77□□□□□ -0.21
PPP3CBP16298 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.77□□□□□ -0.21
PPP3CBP16298 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
PPP3CBP16298 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PPP3CBP16298 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
PPP3CBP16298 AC011477.6-201ENST00000604980 1927 ntBASIC13.77□□□□□ -0.21
PPP3CBP16298 AC020658.6-201ENST00000623564 1870 ntBASIC13.77□□□□□ -0.21
PPP3CBP16298 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.77□□□□□ -0.21
PPP3CBP16298 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
PPP3CBP16298 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.77□□□□□ -0.21
PPP3CBP16298 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
PPP3CBP16298 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PPP3CBP16298 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PPP3CBP16298 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PPP3CBP16298 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PPP3CBP16298 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PPP3CBP16298 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PPP3CBP16298 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PPP3CBP16298 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.76□□□□□ -0.21
PPP3CBP16298 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PPP3CBP16298 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PPP3CBP16298 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.76□□□□□ -0.21
PPP3CBP16298 AC232323.1-201ENST00000540724 2099 ntBASIC13.76□□□□□ -0.21
PPP3CBP16298 REXO1L5P-201ENST00000622260 2098 ntBASIC13.76□□□□□ -0.21
PPP3CBP16298 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.76□□□□□ -0.21
PPP3CBP16298 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.76□□□□□ -0.21
PPP3CBP16298 AC134407.2-201ENST00000625089 1978 ntBASIC13.76□□□□□ -0.21
PPP3CBP16298 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms