Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC005912.2-201ENST00000619492 2400 ntBASIC14.93□□□□□ -0.02
CDH1P12830 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH1P12830 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CDH1P12830 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH1P12830 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH1P12830 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH1P12830 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH1P12830 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH1P12830 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH1P12830 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH1P12830 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.92□□□□□ -0.02
CDH1P12830 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH1P12830 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH1P12830 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH1P12830 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH1P12830 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH1P12830 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH1P12830 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.92□□□□□ -0.02
CDH1P12830 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.92□□□□□ -0.02
CDH1P12830 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.92□□□□□ -0.02
CDH1P12830 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.92□□□□□ -0.02
CDH1P12830 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.92□□□□□ -0.02
CDH1P12830 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CDH1P12830 AL049840.4-201ENST00000602422 811 ntBASIC14.92□□□□□ -0.02
CDH1P12830 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.92□□□□□ -0.02
CDH1P12830 MIR8072-201ENST00000614241 80 ntBASIC14.92□□□□□ -0.02
CDH1P12830 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH1P12830 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH1P12830 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH1P12830 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CDH1P12830 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDH1P12830 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDH1P12830 AJ011931.1-201ENST00000618749 2492 ntBASIC14.92□□□□□ -0.02
CDH1P12830 MYO15B-237ENST00000642007 4893 ntBASIC14.92□□□□□ -0.02
CDH1P12830 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH1P12830 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH1P12830 AC139749.1-202ENST00000617529 3139 ntBASIC14.92□□□□□ -0.02
CDH1P12830 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH1P12830 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH1P12830 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH1P12830 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
CDH1P12830 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 AC007686.3-201ENST00000619017 3487 ntBASIC14.91□□□□□ -0.02
CDH1P12830 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH1P12830 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH1P12830 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH1P12830 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CDH1P12830 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH1P12830 TERF1P3-201ENST00000505638 1227 ntBASIC14.91□□□□□ -0.02
CDH1P12830 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.91□□□□□ -0.02
CDH1P12830 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.91□□□□□ -0.02
CDH1P12830 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.91□□□□□ -0.02
CDH1P12830 RRP7BP-205ENST00000566851 833 ntBASIC14.91□□□□□ -0.02
CDH1P12830 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CDH1P12830 AC099568.2-201ENST00000609194 695 ntBASIC14.91□□□□□ -0.02
CDH1P12830 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH1P12830 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH1P12830 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH1P12830 OR2I1P-209ENST00000641730 5365 ntBASIC14.91□□□□□ -0.02
CDH1P12830 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH1P12830 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH1P12830 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH1P12830 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
CDH1P12830 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CDH1P12830 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH1P12830 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH1P12830 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CDH1P12830 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CDH1P12830 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDH1P12830 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH1P12830 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH1P12830 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms