Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 BTBD7P1-201ENST00000447253 1453 ntBASIC14.85□□□□□ -0.03
KRT6AP02538 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
KRT6AP02538 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 TREML5P-201ENST00000421694 576 ntBASIC14.85□□□□□ -0.03
KRT6AP02538 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.85□□□□□ -0.03
KRT6AP02538 AC241585.1-201ENST00000433527 519 ntBASIC14.85□□□□□ -0.03
KRT6AP02538 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.85□□□□□ -0.03
KRT6AP02538 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.85□□□□□ -0.03
KRT6AP02538 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.85□□□□□ -0.03
KRT6AP02538 IGHV3-42-201ENST00000520410 361 ntBASIC14.85□□□□□ -0.03
KRT6AP02538 AC092337.1-201ENST00000568699 1129 ntBASIC14.85□□□□□ -0.03
KRT6AP02538 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.85□□□□□ -0.03
KRT6AP02538 AL590560.3-201ENST00000623350 461 ntBASIC14.85□□□□□ -0.03
KRT6AP02538 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
KRT6AP02538 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT6AP02538 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
KRT6AP02538 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.84□□□□□ -0.03
KRT6AP02538 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
KRT6AP02538 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
KRT6AP02538 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
KRT6AP02538 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.84□□□□□ -0.03
KRT6AP02538 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.84□□□□□ -0.03
KRT6AP02538 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.84□□□□□ -0.03
KRT6AP02538 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.84□□□□□ -0.03
KRT6AP02538 MIR943-201ENST00000401286 94 ntBASIC14.84□□□□□ -0.03
KRT6AP02538 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.84□□□□□ -0.03
KRT6AP02538 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.84□□□□□ -0.03
KRT6AP02538 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.84□□□□□ -0.03
KRT6AP02538 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.84□□□□□ -0.03
KRT6AP02538 AC114501.2-201ENST00000439631 535 ntBASIC14.84□□□□□ -0.03
KRT6AP02538 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.84□□□□□ -0.03
KRT6AP02538 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.84□□□□□ -0.03
KRT6AP02538 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.84□□□□□ -0.03
KRT6AP02538 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.84□□□□□ -0.03
KRT6AP02538 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.84□□□□□ -0.03
KRT6AP02538 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.84□□□□□ -0.03
KRT6AP02538 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
KRT6AP02538 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.84□□□□□ -0.03
KRT6AP02538 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.84□□□□□ -0.03
KRT6AP02538 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.84□□□□□ -0.03
KRT6AP02538 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.84□□□□□ -0.03
KRT6AP02538 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
KRT6AP02538 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
KRT6AP02538 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.84□□□□□ -0.03
KRT6AP02538 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT6AP02538 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KRT6AP02538 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KRT6AP02538 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KRT6AP02538 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.83□□□□□ -0.03
KRT6AP02538 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KRT6AP02538 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KRT6AP02538 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
KRT6AP02538 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KRT6AP02538 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
KRT6AP02538 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms