Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 AL139385.1-201ENST00000611744 3272 ntBASIC11.54□□□□□ -0.56
HLA-DQA1P01909 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 AP005117.1-201ENST00000584346 1413 ntBASIC11.54□□□□□ -0.56
HLA-DQA1P01909 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 HAL-202ENST00000538703 2637 ntTSL 2 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 EMD-201ENST00000369835 966 ntTSL 3 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 TSPY19P-201ENST00000418461 509 ntBASIC11.54□□□□□ -0.56
HLA-DQA1P01909 GPX1P2-201ENST00000429271 606 ntBASIC11.54□□□□□ -0.56
HLA-DQA1P01909 TSPY18P-201ENST00000441642 509 ntBASIC11.54□□□□□ -0.56
HLA-DQA1P01909 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 SAPCD2P3-201ENST00000455031 850 ntBASIC11.54□□□□□ -0.56
HLA-DQA1P01909 SCARNA2-201ENST00000458748 420 ntBASIC11.54□□□□□ -0.56
HLA-DQA1P01909 SKP2-204ENST00000508514 821 ntTSL 3 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 AL139288.1-201ENST00000623748 933 ntBASIC11.54□□□□□ -0.56
HLA-DQA1P01909 AL022326.1-202ENST00000641533 845 ntBASIC11.54□□□□□ -0.56
HLA-DQA1P01909 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 AL023775.1-201ENST00000454907 1746 ntBASIC11.54□□□□□ -0.56
HLA-DQA1P01909 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
HLA-DQA1P01909 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 AC073548.1-201ENST00000624088 1882 ntBASIC11.53□□□□□ -0.56
HLA-DQA1P01909 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HLA-DQA1P01909 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms