Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD4P01730 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CD4P01730 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.74■□□□□ 0.27
CD4P01730 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.74■□□□□ 0.27
CD4P01730 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD4P01730 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD4P01730 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD4P01730 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD4P01730 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD4P01730 AC092127.1-201ENST00000567093 3455 ntBASIC16.73■□□□□ 0.27
CD4P01730 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD4P01730 AC004899.1-201ENST00000424687 1714 ntBASIC16.73■□□□□ 0.27
CD4P01730 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD4P01730 AC006480.2-201ENST00000609770 1337 ntBASIC16.73■□□□□ 0.27
CD4P01730 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CD4P01730 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.73■□□□□ 0.27
CD4P01730 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD4P01730 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.73■□□□□ 0.27
CD4P01730 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.73■□□□□ 0.27
CD4P01730 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD4P01730 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD4P01730 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD4P01730 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD4P01730 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
CD4P01730 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD4P01730 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD4P01730 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD4P01730 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.73■□□□□ 0.27
CD4P01730 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.73■□□□□ 0.27
CD4P01730 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.73■□□□□ 0.27
CD4P01730 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD4P01730 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.73■□□□□ 0.27
CD4P01730 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.73■□□□□ 0.27
CD4P01730 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD4P01730 AC068587.8-201ENST00000641239 219 ntBASIC16.73■□□□□ 0.27
CD4P01730 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD4P01730 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD4P01730 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD4P01730 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
CD4P01730 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD4P01730 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.73■□□□□ 0.27
CD4P01730 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD4P01730 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD4P01730 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CD4P01730 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD4P01730 CICP13-201ENST00000422015 2789 ntBASIC16.72■□□□□ 0.27
CD4P01730 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CD4P01730 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD4P01730 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD4P01730 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CD4P01730 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CD4P01730 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD4P01730 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CD4P01730 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD4P01730 AC055811.4-201ENST00000624039 1754 ntBASIC16.72■□□□□ 0.27
CD4P01730 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD4P01730 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD4P01730 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD4P01730 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.72■□□□□ 0.27
CD4P01730 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD4P01730 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD4P01730 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD4P01730 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD4P01730 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD4P01730 RPL5P21-201ENST00000404620 815 ntBASIC16.72■□□□□ 0.27
CD4P01730 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD4P01730 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD4P01730 AC069218.1-201ENST00000435269 762 ntBASIC16.72■□□□□ 0.27
CD4P01730 AC008267.1-201ENST00000474858 1069 ntBASIC16.72■□□□□ 0.27
CD4P01730 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.72■□□□□ 0.27
CD4P01730 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.72■□□□□ 0.27
CD4P01730 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.72■□□□□ 0.27
CD4P01730 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.72■□□□□ 0.27
CD4P01730 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.72■□□□□ 0.27
CD4P01730 AL162426.1-201ENST00000624141 743 ntBASIC16.72■□□□□ 0.27
CD4P01730 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CD4P01730 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CD4P01730 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD4P01730 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD4P01730 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD4P01730 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.72■□□□□ 0.27
CD4P01730 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD4P01730 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CD4P01730 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD4P01730 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD4P01730 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD4P01730 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CD4P01730 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
CD4P01730 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD4P01730 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CD4P01730 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CD4P01730 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD4P01730 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD4P01730 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD4P01730 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD4P01730 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD4P01730 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD4P01730 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD4P01730 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CD4P01730 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms