Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DUX1O43812 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
DUX1O43812 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.55□□□□□ -0.08
DUX1O43812 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DUX1O43812 AC020658.6-201ENST00000623564 1870 ntBASIC14.55□□□□□ -0.08
DUX1O43812 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
DUX1O43812 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
DUX1O43812 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
DUX1O43812 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 AC004945.1-201ENST00000416738 983 ntBASIC14.54□□□□□ -0.08
DUX1O43812 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
DUX1O43812 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.54□□□□□ -0.08
DUX1O43812 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.54□□□□□ -0.08
DUX1O43812 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.54□□□□□ -0.08
DUX1O43812 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
DUX1O43812 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 AL137783.1-201ENST00000623494 1896 ntBASIC14.54□□□□□ -0.08
DUX1O43812 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
DUX1O43812 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
DUX1O43812 MST1L-201ENST00000442552 2185 ntBASIC14.54□□□□□ -0.08
DUX1O43812 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.54□□□□□ -0.08
DUX1O43812 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.54□□□□□ -0.08
DUX1O43812 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.54□□□□□ -0.08
DUX1O43812 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
DUX1O43812 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
DUX1O43812 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
DUX1O43812 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 AC008894.3-201ENST00000624324 3103 ntBASIC14.53□□□□□ -0.08
DUX1O43812 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.53□□□□□ -0.08
DUX1O43812 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.53□□□□□ -0.08
DUX1O43812 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.53□□□□□ -0.08
DUX1O43812 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.53□□□□□ -0.08
DUX1O43812 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.53□□□□□ -0.08
DUX1O43812 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.53□□□□□ -0.08
DUX1O43812 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
DUX1O43812 FKBP4P6-201ENST00000457486 1332 ntBASIC14.53□□□□□ -0.08
DUX1O43812 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.53□□□□□ -0.08
DUX1O43812 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.53□□□□□ -0.08
DUX1O43812 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.53□□□□□ -0.08
DUX1O43812 HIST2H2BB-201ENST00000449108 381 ntBASIC14.53□□□□□ -0.08
DUX1O43812 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.53□□□□□ -0.08
DUX1O43812 AP003171.2-201ENST00000528208 925 ntBASIC14.53□□□□□ -0.08
DUX1O43812 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.53□□□□□ -0.08
DUX1O43812 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.53□□□□□ -0.08
DUX1O43812 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.53□□□□□ -0.08
DUX1O43812 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.53□□□□□ -0.08
DUX1O43812 AC020914.3-201ENST00000594712 304 ntBASIC14.53□□□□□ -0.08
DUX1O43812 AC004466.1-201ENST00000599515 1080 ntBASIC14.53□□□□□ -0.08
DUX1O43812 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.53□□□□□ -0.08
DUX1O43812 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
DUX1O43812 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms