Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXN1O15353 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXN1O15353 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXN1O15353 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
FOXN1O15353 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXN1O15353 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXN1O15353 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXN1O15353 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXN1O15353 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXN1O15353 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXN1O15353 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.16■□□□□ 0.5
FOXN1O15353 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXN1O15353 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
FOXN1O15353 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC18.16■□□□□ 0.5
FOXN1O15353 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXN1O15353 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.16■□□□□ 0.5
FOXN1O15353 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXN1O15353 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.16■□□□□ 0.5
FOXN1O15353 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC18.16■□□□□ 0.5
FOXN1O15353 AC244157.2-201ENST00000616239 1006 ntBASIC18.16■□□□□ 0.5
FOXN1O15353 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXN1O15353 AL354989.2-201ENST00000435838 1540 ntBASIC18.16■□□□□ 0.5
FOXN1O15353 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC18.16■□□□□ 0.5
FOXN1O15353 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
FOXN1O15353 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXN1O15353 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18.16■□□□□ 0.5
FOXN1O15353 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXN1O15353 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
FOXN1O15353 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXN1O15353 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.15■□□□□ 0.5
FOXN1O15353 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
FOXN1O15353 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
FOXN1O15353 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.15■□□□□ 0.5
FOXN1O15353 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXN1O15353 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXN1O15353 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXN1O15353 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC18.15■□□□□ 0.5
FOXN1O15353 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
FOXN1O15353 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXN1O15353 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC18.15■□□□□ 0.5
FOXN1O15353 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
FOXN1O15353 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXN1O15353 AC005740.2-201ENST00000511085 419 ntBASIC18.15■□□□□ 0.5
FOXN1O15353 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.15■□□□□ 0.5
FOXN1O15353 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC18.15■□□□□ 0.5
FOXN1O15353 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.15■□□□□ 0.5
FOXN1O15353 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.15■□□□□ 0.5
FOXN1O15353 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXN1O15353 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXN1O15353 MIR4321-201ENST00000592276 80 ntBASIC18.15■□□□□ 0.5
FOXN1O15353 AC012044.1-201ENST00000603431 297 ntBASIC18.15■□□□□ 0.5
FOXN1O15353 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXN1O15353 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXN1O15353 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXN1O15353 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
FOXN1O15353 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
FOXN1O15353 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXN1O15353 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
FOXN1O15353 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
FOXN1O15353 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
FOXN1O15353 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.14■□□□□ 0.5
FOXN1O15353 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.14■□□□□ 0.49
FOXN1O15353 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.14■□□□□ 0.49
FOXN1O15353 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.14■□□□□ 0.49
FOXN1O15353 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
FOXN1O15353 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXN1O15353 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXN1O15353 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.14■□□□□ 0.49
FOXN1O15353 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXN1O15353 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC18.14■□□□□ 0.49
FOXN1O15353 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXN1O15353 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.14■□□□□ 0.49
FOXN1O15353 AC005730.2-201ENST00000564549 1184 ntBASIC18.14■□□□□ 0.49
FOXN1O15353 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC18.14■□□□□ 0.49
FOXN1O15353 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.14■□□□□ 0.49
FOXN1O15353 AC020922.3-201ENST00000595064 547 ntBASIC18.14■□□□□ 0.49
FOXN1O15353 ECM1P1-201ENST00000604092 1279 ntBASIC18.14■□□□□ 0.49
FOXN1O15353 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.14■□□□□ 0.49
FOXN1O15353 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
FOXN1O15353 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXN1O15353 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXN1O15353 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FOXN1O15353 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.14■□□□□ 0.49
FOXN1O15353 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
FOXN1O15353 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXN1O15353 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FOXN1O15353 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXN1O15353 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.14■□□□□ 0.49
FOXN1O15353 SSR4P1-203ENST00000599569 2260 ntBASIC18.14■□□□□ 0.49
FOXN1O15353 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.14■□□□□ 0.49
FOXN1O15353 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FOXN1O15353 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.13■□□□□ 0.49
FOXN1O15353 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXN1O15353 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXN1O15353 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXN1O15353 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXN1O15353 AC018892.3-201ENST00000623986 2499 ntBASIC18.13■□□□□ 0.49
FOXN1O15353 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXN1O15353 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXN1O15353 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms