Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
UPK1AO00322 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
UPK1AO00322 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1AO00322 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.47□□□□□ -0.09
UPK1AO00322 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1AO00322 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1AO00322 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1AO00322 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1AO00322 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.47□□□□□ -0.09
UPK1AO00322 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1AO00322 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1AO00322 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
UPK1AO00322 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1AO00322 CLK3P2-201ENST00000427566 1453 ntBASIC14.47□□□□□ -0.09
UPK1AO00322 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.47□□□□□ -0.09
UPK1AO00322 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.47□□□□□ -0.09
UPK1AO00322 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1AO00322 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.47□□□□□ -0.09
UPK1AO00322 RNA5SP421-201ENST00000516864 134 ntBASIC14.47□□□□□ -0.09
UPK1AO00322 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.47□□□□□ -0.09
UPK1AO00322 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.47□□□□□ -0.09
UPK1AO00322 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.47□□□□□ -0.09
UPK1AO00322 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.47□□□□□ -0.09
UPK1AO00322 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1AO00322 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1AO00322 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.47□□□□□ -0.09
UPK1AO00322 AL645728.2-202ENST00000641679 227 ntBASIC14.47□□□□□ -0.09
UPK1AO00322 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
UPK1AO00322 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1AO00322 AC092135.3-201ENST00000624151 1846 ntBASIC14.47□□□□□ -0.09
UPK1AO00322 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1AO00322 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1AO00322 INTS4P1-203ENST00000641008 3683 ntBASIC14.47□□□□□ -0.09
UPK1AO00322 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1AO00322 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1AO00322 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1AO00322 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1AO00322 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
UPK1AO00322 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.47□□□□□ -0.09
UPK1AO00322 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1AO00322 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1AO00322 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1AO00322 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1AO00322 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1AO00322 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1AO00322 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.46□□□□□ -0.09
UPK1AO00322 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
UPK1AO00322 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1AO00322 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1AO00322 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
UPK1AO00322 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1AO00322 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1AO00322 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
UPK1AO00322 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1AO00322 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.46□□□□□ -0.09
UPK1AO00322 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1AO00322 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1AO00322 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
UPK1AO00322 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1AO00322 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.46□□□□□ -0.09
UPK1AO00322 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.46□□□□□ -0.09
UPK1AO00322 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.46□□□□□ -0.09
UPK1AO00322 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.46□□□□□ -0.09
UPK1AO00322 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1AO00322 DOC2GP-202ENST00000514950 1163 ntBASIC14.46□□□□□ -0.09
UPK1AO00322 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.46□□□□□ -0.09
UPK1AO00322 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.46□□□□□ -0.09
UPK1AO00322 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.46□□□□□ -0.09
UPK1AO00322 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.46□□□□□ -0.09
UPK1AO00322 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1AO00322 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1AO00322 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
UPK1AO00322 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1AO00322 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1AO00322 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1AO00322 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1AO00322 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
UPK1AO00322 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
UPK1AO00322 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.46□□□□□ -0.1
UPK1AO00322 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.46□□□□□ -0.1
UPK1AO00322 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
UPK1AO00322 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
UPK1AO00322 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
UPK1AO00322 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.46□□□□□ -0.1
UPK1AO00322 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
UPK1AO00322 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
UPK1AO00322 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
UPK1AO00322 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
UPK1AO00322 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
UPK1AO00322 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.45□□□□□ -0.1
UPK1AO00322 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
UPK1AO00322 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1AO00322 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1AO00322 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1AO00322 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1AO00322 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1AO00322 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms