Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 GNAQP1-201ENST00000444815 1067 ntBASIC15.88■□□□□ 0.13
SRRM3A6NNA2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 HLA-V-204ENST00000476601 1289 ntBASIC15.88■□□□□ 0.13
SRRM3A6NNA2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 WASH4P-201ENST00000564273 1246 ntBASIC15.88■□□□□ 0.13
SRRM3A6NNA2 RN7SL190P-201ENST00000582519 257 ntBASIC15.88■□□□□ 0.13
SRRM3A6NNA2 AC027307.2-201ENST00000591252 911 ntBASIC15.88■□□□□ 0.13
SRRM3A6NNA2 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 AL009183.1-201ENST00000603760 355 ntBASIC15.88■□□□□ 0.13
SRRM3A6NNA2 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 AC011474.4-201ENST00000623523 2076 ntBASIC15.88■□□□□ 0.13
SRRM3A6NNA2 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRRM3A6NNA2 ACE3P-201ENST00000423435 1973 ntBASIC15.87■□□□□ 0.13
SRRM3A6NNA2 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 CICP17-201ENST00000418553 2377 ntBASIC15.87■□□□□ 0.13
SRRM3A6NNA2 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 BNIP3P42-201ENST00000454982 569 ntBASIC15.87■□□□□ 0.13
SRRM3A6NNA2 RN7SL837P-201ENST00000463010 287 ntBASIC15.87■□□□□ 0.13
SRRM3A6NNA2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 AC103810.3-201ENST00000583567 96 ntBASIC15.87■□□□□ 0.13
SRRM3A6NNA2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 BNIP3P29-201ENST00000598302 571 ntBASIC15.87■□□□□ 0.13
SRRM3A6NNA2 AC011447.5-201ENST00000616168 564 ntBASIC15.87■□□□□ 0.13
SRRM3A6NNA2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRRM3A6NNA2 AC020907.1-201ENST00000616460 1350 ntBASIC15.87■□□□□ 0.13
SRRM3A6NNA2 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 LINC01230-201ENST00000625222 3017 ntBASIC15.86■□□□□ 0.13
SRRM3A6NNA2 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.86■□□□□ 0.13
SRRM3A6NNA2 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRRM3A6NNA2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms