Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
HMX3A6NHT5 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HMX3A6NHT5 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
HMX3A6NHT5 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 AC134407.2-201ENST00000625089 1978 ntBASIC13.31□□□□□ -0.28
HMX3A6NHT5 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.31□□□□□ -0.28
HMX3A6NHT5 AC018712.1-201ENST00000455767 687 ntBASIC13.31□□□□□ -0.28
HMX3A6NHT5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 MIR4313-201ENST00000580760 101 ntBASIC13.31□□□□□ -0.28
HMX3A6NHT5 RN7SL510P-201ENST00000581311 263 ntBASIC13.31□□□□□ -0.28
HMX3A6NHT5 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 AL356488.2-201ENST00000602755 427 ntBASIC13.31□□□□□ -0.28
HMX3A6NHT5 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 GGTLC5P-201ENST00000617623 998 ntBASIC13.31□□□□□ -0.28
HMX3A6NHT5 AL691432.3-201ENST00000621860 400 ntBASIC13.31□□□□□ -0.28
HMX3A6NHT5 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 AP001350.2-201ENST00000625104 1094 ntBASIC13.31□□□□□ -0.28
HMX3A6NHT5 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
HMX3A6NHT5 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMX3A6NHT5 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HMX3A6NHT5 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.3□□□□□ -0.28
HMX3A6NHT5 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMX3A6NHT5 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
HMX3A6NHT5 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMX3A6NHT5 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMX3A6NHT5 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMX3A6NHT5 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMX3A6NHT5 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.3□□□□□ -0.28
HMX3A6NHT5 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
HMX3A6NHT5 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.3□□□□□ -0.28
HMX3A6NHT5 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.3□□□□□ -0.28
HMX3A6NHT5 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HMX3A6NHT5 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMX3A6NHT5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
HMX3A6NHT5 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMX3A6NHT5 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMX3A6NHT5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMX3A6NHT5 AC004870.1-201ENST00000315132 882 ntBASIC13.3□□□□□ -0.28
HMX3A6NHT5 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMX3A6NHT5 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.3□□□□□ -0.28
HMX3A6NHT5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.3□□□□□ -0.28
HMX3A6NHT5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HMX3A6NHT5 KRT18P67-201ENST00000432816 1264 ntBASIC13.3□□□□□ -0.28
HMX3A6NHT5 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
HMX3A6NHT5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.3□□□□□ -0.28
HMX3A6NHT5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.3□□□□□ -0.28
HMX3A6NHT5 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.3□□□□□ -0.28
HMX3A6NHT5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.3□□□□□ -0.28
HMX3A6NHT5 AL731571.1-201ENST00000617058 5428 ntBASIC13.3□□□□□ -0.28
HMX3A6NHT5 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HMX3A6NHT5 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMX3A6NHT5 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.3□□□□□ -0.28
HMX3A6NHT5 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms